Protein–RNA interactions for Protein: A0A0G2JEV5

Trav7-1, T cell receptor alpha variable 7-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-1A0A0G2JEV5 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7-1A0A0G2JEV5 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7-1A0A0G2JEV5 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7-1A0A0G2JEV5 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7-1A0A0G2JEV5 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.48□□□□□ -0.25
Trav7-1A0A0G2JEV5 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7-1A0A0G2JEV5 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7-1A0A0G2JEV5 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trav7-1A0A0G2JEV5 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7-1A0A0G2JEV5 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7-1A0A0G2JEV5 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7-1A0A0G2JEV5 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trav7-1A0A0G2JEV5 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav7-1A0A0G2JEV5 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7-1A0A0G2JEV5 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7-1A0A0G2JEV5 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7-1A0A0G2JEV5 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7-1A0A0G2JEV5 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7-1A0A0G2JEV5 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7-1A0A0G2JEV5 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7-1A0A0G2JEV5 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC13.47□□□□□ -0.25
Trav7-1A0A0G2JEV5 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7-1A0A0G2JEV5 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7-1A0A0G2JEV5 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Trav7-1A0A0G2JEV5 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7-1A0A0G2JEV5 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC13.47□□□□□ -0.25
Trav7-1A0A0G2JEV5 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trav7-1A0A0G2JEV5 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7-1A0A0G2JEV5 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7-1A0A0G2JEV5 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7-1A0A0G2JEV5 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trav7-1A0A0G2JEV5 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trav7-1A0A0G2JEV5 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC13.47□□□□□ -0.25
Trav7-1A0A0G2JEV5 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7-1A0A0G2JEV5 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7-1A0A0G2JEV5 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7-1A0A0G2JEV5 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Trav7-1A0A0G2JEV5 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7-1A0A0G2JEV5 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7-1A0A0G2JEV5 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7-1A0A0G2JEV5 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7-1A0A0G2JEV5 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7-1A0A0G2JEV5 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7-1A0A0G2JEV5 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trav7-1A0A0G2JEV5 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Trav7-1A0A0G2JEV5 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav7-1A0A0G2JEV5 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Trav7-1A0A0G2JEV5 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trav7-1A0A0G2JEV5 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
Trav7-1A0A0G2JEV5 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trav7-1A0A0G2JEV5 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Trav7-1A0A0G2JEV5 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Trav7-1A0A0G2JEV5 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7-1A0A0G2JEV5 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7-1A0A0G2JEV5 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7-1A0A0G2JEV5 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7-1A0A0G2JEV5 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7-1A0A0G2JEV5 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trav7-1A0A0G2JEV5 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7-1A0A0G2JEV5 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7-1A0A0G2JEV5 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7-1A0A0G2JEV5 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7-1A0A0G2JEV5 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.45□□□□□ -0.26
Trav7-1A0A0G2JEV5 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trav7-1A0A0G2JEV5 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trav7-1A0A0G2JEV5 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7-1A0A0G2JEV5 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Trav7-1A0A0G2JEV5 Gm29791-202ENSMUST00000207888 369 ntBASIC13.45□□□□□ -0.26
Trav7-1A0A0G2JEV5 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7-1A0A0G2JEV5 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7-1A0A0G2JEV5 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7-1A0A0G2JEV5 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7-1A0A0G2JEV5 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7-1A0A0G2JEV5 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7-1A0A0G2JEV5 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7-1A0A0G2JEV5 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7-1A0A0G2JEV5 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7-1A0A0G2JEV5 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7-1A0A0G2JEV5 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7-1A0A0G2JEV5 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7-1A0A0G2JEV5 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trav7-1A0A0G2JEV5 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7-1A0A0G2JEV5 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav7-1A0A0G2JEV5 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7-1A0A0G2JEV5 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7-1A0A0G2JEV5 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Trav7-1A0A0G2JEV5 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7-1A0A0G2JEV5 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC13.44□□□□□ -0.26
Trav7-1A0A0G2JEV5 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7-1A0A0G2JEV5 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7-1A0A0G2JEV5 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7-1A0A0G2JEV5 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7-1A0A0G2JEV5 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Trav7-1A0A0G2JEV5 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Trav7-1A0A0G2JEV5 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
Trav7-1A0A0G2JEV5 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC13.44□□□□□ -0.26
Trav7-1A0A0G2JEV5 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav7-1A0A0G2JEV5 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC13.44□□□□□ -0.26
Trav7-1A0A0G2JEV5 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC13.44□□□□□ -0.26
Trav7-1A0A0G2JEV5 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms