Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3n-3A0A0G2JEM0 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC13.25□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3n-3A0A0G2JEM0 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC13.25□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Trav3n-3A0A0G2JEM0 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3n-3A0A0G2JEM0 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Trav3n-3A0A0G2JEM0 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3n-3A0A0G2JEM0 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Gm43173-201ENSMUST00000202246 593 ntBASIC13.24□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav3n-3A0A0G2JEM0 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.23□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC13.23□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3n-3A0A0G2JEM0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3n-3A0A0G2JEM0 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC13.22□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav3n-3A0A0G2JEM0 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms