Protein–RNA interactions for Protein: A0A0B4J1J2

Igkv5-43, Immunoglobulin kappa chain variable 5-43 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-43A0A0B4J1J2 Gm8969-201ENSMUST00000199694 526 ntBASIC17.87■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.87■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Gm7370-201ENSMUST00000219471 767 ntBASIC17.87■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.87■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.87■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Igkv5-43A0A0B4J1J2 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Gm16061-201ENSMUST00000122167 857 ntBASIC17.85■□□□□ 0.45
Igkv5-43A0A0B4J1J2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.85■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Igkv5-43A0A0B4J1J2 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.85■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Gm18032-201ENSMUST00000222541 538 ntBASIC17.85■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.84■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Mir5130-201ENSMUST00000175160 84 ntBASIC17.84■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.84■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.84■□□□□ 0.45
Igkv5-43A0A0B4J1J2 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Igkv5-43A0A0B4J1J2 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Igkv5-43A0A0B4J1J2 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Igkv5-43A0A0B4J1J2 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Igkv5-43A0A0B4J1J2 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Igkv5-43A0A0B4J1J2 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC17.83■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Igkv5-43A0A0B4J1J2 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Igkv5-43A0A0B4J1J2 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.82■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Igkv5-43A0A0B4J1J2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.82■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.82■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.81■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.8■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.8■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.8■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.8■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.8■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Igkv5-43A0A0B4J1J2 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms