Protein–RNA interactions for Protein: A0A0B4J1J1

Igkv5-45, Immunoglobulin kappa chain variable 5-45 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv5-45A0A0B4J1J1 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC17.92■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.92■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.92■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC17.92■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.92■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Gm7370-201ENSMUST00000219471 767 ntBASIC17.92■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Gm18032-201ENSMUST00000222541 538 ntBASIC17.92■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.92■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.91■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Mir5130-201ENSMUST00000175160 84 ntBASIC17.91■□□□□ 0.46
Igkv5-45A0A0B4J1J1 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-45A0A0B4J1J1 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.9■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Gm16061-201ENSMUST00000122167 857 ntBASIC17.9■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.9■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Igkv5-45A0A0B4J1J1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-45A0A0B4J1J1 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Igkv5-45A0A0B4J1J1 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Igkv5-45A0A0B4J1J1 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.89■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC17.88■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Igkv5-45A0A0B4J1J1 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Igkv5-45A0A0B4J1J1 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC17.88■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.88■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Igkv5-45A0A0B4J1J1 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Igkv5-45A0A0B4J1J1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Igkv5-45A0A0B4J1J1 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.86■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.86■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.86■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.86■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Igkv5-45A0A0B4J1J1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Igkv5-45A0A0B4J1J1 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC17.85■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Igkv5-45A0A0B4J1J1 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.85■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.85■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Igkv5-45A0A0B4J1J1 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Igkv5-45A0A0B4J1J1 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms