Protein–RNA interactions for Protein: A0A0B4J1I1

Igkv16-104, Immunoglobulin kappa variable 16-104 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv16-104A0A0B4J1I1 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.73■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Gm37722-201ENSMUST00000193757 208 ntBASIC17.72■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.72■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Igkv16-104A0A0B4J1I1 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC17.71■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.7■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.7■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Mir770-201ENSMUST00000103252 94 ntBASIC17.7■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Igkv16-104A0A0B4J1I1 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Gm6623-201ENSMUST00000173570 544 ntBASIC17.7■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Gm27357-201ENSMUST00000183754 135 ntBASIC17.7■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Gm19721-201ENSMUST00000195284 1764 ntBASIC17.7■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Igkv16-104A0A0B4J1I1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Igkv16-104A0A0B4J1I1 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.69■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Igkv16-104A0A0B4J1I1 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.69■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Igkv16-104A0A0B4J1I1 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.69■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.68■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Igkv16-104A0A0B4J1I1 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Igkv16-104A0A0B4J1I1 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms