Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv19A0A0B4J1H4 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv19A0A0B4J1H4 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv19A0A0B4J1H4 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trbv19A0A0B4J1H4 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trbv19A0A0B4J1H4 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv19A0A0B4J1H4 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv19A0A0B4J1H4 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv19A0A0B4J1H4 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.05□□□□□ -0.16
Trbv19A0A0B4J1H4 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.05□□□□□ -0.16
Trbv19A0A0B4J1H4 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv19A0A0B4J1H4 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.05□□□□□ -0.16
Trbv19A0A0B4J1H4 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC14.05□□□□□ -0.16
Trbv19A0A0B4J1H4 Gm37179-201ENSMUST00000194862 823 ntBASIC14.05□□□□□ -0.16
Trbv19A0A0B4J1H4 Gm5408-201ENSMUST00000197998 747 ntBASIC14.05□□□□□ -0.16
Trbv19A0A0B4J1H4 AC122769.4-201ENSMUST00000228166 901 ntBASIC14.05□□□□□ -0.16
Trbv19A0A0B4J1H4 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trbv19A0A0B4J1H4 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv19A0A0B4J1H4 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv19A0A0B4J1H4 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.05□□□□□ -0.16
Trbv19A0A0B4J1H4 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv19A0A0B4J1H4 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv19A0A0B4J1H4 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv19A0A0B4J1H4 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv19A0A0B4J1H4 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv19A0A0B4J1H4 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trbv19A0A0B4J1H4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv19A0A0B4J1H4 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv19A0A0B4J1H4 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv19A0A0B4J1H4 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC14.04□□□□□ -0.16
Trbv19A0A0B4J1H4 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv19A0A0B4J1H4 Mir2861-201ENSMUST00000175539 82 ntBASIC14.04□□□□□ -0.16
Trbv19A0A0B4J1H4 Gm44672-201ENSMUST00000206944 1098 ntBASIC14.04□□□□□ -0.16
Trbv19A0A0B4J1H4 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv19A0A0B4J1H4 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv19A0A0B4J1H4 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv19A0A0B4J1H4 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv19A0A0B4J1H4 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC14.04□□□□□ -0.16
Trbv19A0A0B4J1H4 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv19A0A0B4J1H4 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv19A0A0B4J1H4 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv19A0A0B4J1H4 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trbv19A0A0B4J1H4 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv19A0A0B4J1H4 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv19A0A0B4J1H4 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv19A0A0B4J1H4 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv19A0A0B4J1H4 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv19A0A0B4J1H4 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trbv19A0A0B4J1H4 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.03□□□□□ -0.16
Trbv19A0A0B4J1H4 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trbv19A0A0B4J1H4 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv19A0A0B4J1H4 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv19A0A0B4J1H4 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC14.03□□□□□ -0.16
Trbv19A0A0B4J1H4 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC14.03□□□□□ -0.16
Trbv19A0A0B4J1H4 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv19A0A0B4J1H4 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv19A0A0B4J1H4 Mir8112-201ENSMUST00000184382 131 ntBASIC14.03□□□□□ -0.16
Trbv19A0A0B4J1H4 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC14.03□□□□□ -0.16
Trbv19A0A0B4J1H4 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trbv19A0A0B4J1H4 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv19A0A0B4J1H4 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv19A0A0B4J1H4 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv19A0A0B4J1H4 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv19A0A0B4J1H4 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv19A0A0B4J1H4 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv19A0A0B4J1H4 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv19A0A0B4J1H4 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Trbv19A0A0B4J1H4 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv19A0A0B4J1H4 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv19A0A0B4J1H4 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv19A0A0B4J1H4 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv19A0A0B4J1H4 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Trbv19A0A0B4J1H4 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv19A0A0B4J1H4 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.02□□□□□ -0.16
Trbv19A0A0B4J1H4 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
Trbv19A0A0B4J1H4 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv19A0A0B4J1H4 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv19A0A0B4J1H4 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trbv19A0A0B4J1H4 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.02□□□□□ -0.17
Trbv19A0A0B4J1H4 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC14.02□□□□□ -0.17
Trbv19A0A0B4J1H4 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC14.02□□□□□ -0.17
Trbv19A0A0B4J1H4 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC14.02□□□□□ -0.17
Trbv19A0A0B4J1H4 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv19A0A0B4J1H4 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv19A0A0B4J1H4 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv19A0A0B4J1H4 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trbv19A0A0B4J1H4 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv19A0A0B4J1H4 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv19A0A0B4J1H4 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv19A0A0B4J1H4 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv19A0A0B4J1H4 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trbv19A0A0B4J1H4 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv19A0A0B4J1H4 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv19A0A0B4J1H4 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv19A0A0B4J1H4 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trbv19A0A0B4J1H4 Gm3807-201ENSMUST00000193520 1168 ntBASIC14.01□□□□□ -0.17
Trbv19A0A0B4J1H4 Gm2559-201ENSMUST00000201323 363 ntBASIC14.01□□□□□ -0.17
Trbv19A0A0B4J1H4 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv19A0A0B4J1H4 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv19A0A0B4J1H4 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms