Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Trbv13-3A0A0B4J1H2 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC13.64□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC13.64□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC13.64□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv13-3A0A0B4J1H2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.64□□□□□ -0.23
Trbv13-3A0A0B4J1H2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC13.64□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC13.63□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC13.63□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC13.63□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.63□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv13-3A0A0B4J1H2 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.63□□□□□ -0.23
Trbv13-3A0A0B4J1H2 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC13.62□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Gm12922-201ENSMUST00000120626 809 ntBASIC13.62□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC13.62□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC13.62□□□□□ -0.23
Trbv13-3A0A0B4J1H2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Gm43272-201ENSMUST00000200599 1584 ntBASIC13.62□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC13.61□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv13-3A0A0B4J1H2 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.61□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Gm12251-201ENSMUST00000117893 792 ntBASIC13.61□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC13.61□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Trbv13-3A0A0B4J1H2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms