Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trbv3A0A0A6YYE2 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trbv3A0A0A6YYE2 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trbv3A0A0A6YYE2 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trbv3A0A0A6YYE2 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trbv3A0A0A6YYE2 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trbv3A0A0A6YYE2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trbv3A0A0A6YYE2 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trbv3A0A0A6YYE2 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trbv3A0A0A6YYE2 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trbv3A0A0A6YYE2 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trbv3A0A0A6YYE2 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trbv3A0A0A6YYE2 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trbv3A0A0A6YYE2 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
Trbv3A0A0A6YYE2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trbv3A0A0A6YYE2 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trbv3A0A0A6YYE2 Wdr70-203ENSMUST00000227371 1130 ntBASIC13.5□□□□□ -0.25
Trbv3A0A0A6YYE2 Gm9847-201ENSMUST00000052528 599 ntBASIC13.5□□□□□ -0.25
Trbv3A0A0A6YYE2 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Trbv3A0A0A6YYE2 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trbv3A0A0A6YYE2 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trbv3A0A0A6YYE2 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.5□□□□□ -0.25
Trbv3A0A0A6YYE2 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trbv3A0A0A6YYE2 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.5□□□□□ -0.25
Trbv3A0A0A6YYE2 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trbv3A0A0A6YYE2 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trbv3A0A0A6YYE2 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trbv3A0A0A6YYE2 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Trbv3A0A0A6YYE2 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trbv3A0A0A6YYE2 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Trbv3A0A0A6YYE2 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trbv3A0A0A6YYE2 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trbv3A0A0A6YYE2 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trbv3A0A0A6YYE2 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.49□□□□□ -0.25
Trbv3A0A0A6YYE2 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trbv3A0A0A6YYE2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC13.49□□□□□ -0.25
Trbv3A0A0A6YYE2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trbv3A0A0A6YYE2 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trbv3A0A0A6YYE2 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trbv3A0A0A6YYE2 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trbv3A0A0A6YYE2 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trbv3A0A0A6YYE2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trbv3A0A0A6YYE2 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trbv3A0A0A6YYE2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC13.49□□□□□ -0.25
Trbv3A0A0A6YYE2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC13.49□□□□□ -0.25
Trbv3A0A0A6YYE2 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC13.49□□□□□ -0.25
Trbv3A0A0A6YYE2 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trbv3A0A0A6YYE2 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC13.49□□□□□ -0.25
Trbv3A0A0A6YYE2 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trbv3A0A0A6YYE2 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC13.49□□□□□ -0.25
Trbv3A0A0A6YYE2 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trbv3A0A0A6YYE2 Gm45102-201ENSMUST00000207427 857 ntBASIC13.49□□□□□ -0.25
Trbv3A0A0A6YYE2 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trbv3A0A0A6YYE2 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trbv3A0A0A6YYE2 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trbv3A0A0A6YYE2 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trbv3A0A0A6YYE2 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Trbv3A0A0A6YYE2 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trbv3A0A0A6YYE2 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trbv3A0A0A6YYE2 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trbv3A0A0A6YYE2 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trbv3A0A0A6YYE2 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trbv3A0A0A6YYE2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC13.48□□□□□ -0.25
Trbv3A0A0A6YYE2 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.48□□□□□ -0.25
Trbv3A0A0A6YYE2 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trbv3A0A0A6YYE2 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trbv3A0A0A6YYE2 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trbv3A0A0A6YYE2 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trbv3A0A0A6YYE2 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trbv3A0A0A6YYE2 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trbv3A0A0A6YYE2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trbv3A0A0A6YYE2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trbv3A0A0A6YYE2 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trbv3A0A0A6YYE2 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trbv3A0A0A6YYE2 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC13.48□□□□□ -0.25
Trbv3A0A0A6YYE2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trbv3A0A0A6YYE2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trbv3A0A0A6YYE2 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trbv3A0A0A6YYE2 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trbv3A0A0A6YYE2 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trbv3A0A0A6YYE2 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trbv3A0A0A6YYE2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trbv3A0A0A6YYE2 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trbv3A0A0A6YYE2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trbv3A0A0A6YYE2 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.47□□□□□ -0.25
Trbv3A0A0A6YYE2 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trbv3A0A0A6YYE2 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trbv3A0A0A6YYE2 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trbv3A0A0A6YYE2 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
Trbv3A0A0A6YYE2 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trbv3A0A0A6YYE2 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC13.47□□□□□ -0.25
Trbv3A0A0A6YYE2 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC13.47□□□□□ -0.25
Trbv3A0A0A6YYE2 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC13.47□□□□□ -0.25
Trbv3A0A0A6YYE2 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trbv3A0A0A6YYE2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trbv3A0A0A6YYE2 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trbv3A0A0A6YYE2 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
Trbv3A0A0A6YYE2 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trbv3A0A0A6YYE2 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trbv3A0A0A6YYE2 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms