Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.15■□□□□ 0.18
Ighv1-42A0A0A6YY38 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-42A0A0A6YY38 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-42A0A0A6YY38 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-42A0A0A6YY38 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-42A0A0A6YY38 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Ighv1-42A0A0A6YY38 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.15■□□□□ 0.18
Ighv1-42A0A0A6YY38 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Ighv1-42A0A0A6YY38 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-42A0A0A6YY38 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Ighv1-42A0A0A6YY38 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-42A0A0A6YY38 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.14■□□□□ 0.17
Ighv1-42A0A0A6YY38 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC16.14■□□□□ 0.17
Ighv1-42A0A0A6YY38 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ighv1-42A0A0A6YY38 Gm6345-202ENSMUST00000180900 204 ntBASIC16.14■□□□□ 0.17
Ighv1-42A0A0A6YY38 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC16.14■□□□□ 0.17
Ighv1-42A0A0A6YY38 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-42A0A0A6YY38 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-42A0A0A6YY38 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-42A0A0A6YY38 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.14■□□□□ 0.17
Ighv1-42A0A0A6YY38 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.14■□□□□ 0.17
Ighv1-42A0A0A6YY38 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Ighv1-42A0A0A6YY38 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-42A0A0A6YY38 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.13■□□□□ 0.17
Ighv1-42A0A0A6YY38 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.13■□□□□ 0.17
Ighv1-42A0A0A6YY38 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-42A0A0A6YY38 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-42A0A0A6YY38 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-42A0A0A6YY38 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-42A0A0A6YY38 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-42A0A0A6YY38 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-42A0A0A6YY38 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-42A0A0A6YY38 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ighv1-42A0A0A6YY38 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.13■□□□□ 0.17
Ighv1-42A0A0A6YY38 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.13■□□□□ 0.17
Ighv1-42A0A0A6YY38 Gm27389-201ENSMUST00000183622 195 ntBASIC16.13■□□□□ 0.17
Ighv1-42A0A0A6YY38 Mir1668-201ENSMUST00000184114 107 ntBASIC16.13■□□□□ 0.17
Ighv1-42A0A0A6YY38 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.13■□□□□ 0.17
Ighv1-42A0A0A6YY38 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-42A0A0A6YY38 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-42A0A0A6YY38 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-42A0A0A6YY38 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-42A0A0A6YY38 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-42A0A0A6YY38 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-42A0A0A6YY38 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-42A0A0A6YY38 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-42A0A0A6YY38 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-42A0A0A6YY38 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-42A0A0A6YY38 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-42A0A0A6YY38 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-42A0A0A6YY38 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-42A0A0A6YY38 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-42A0A0A6YY38 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC16.12■□□□□ 0.17
Ighv1-42A0A0A6YY38 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-42A0A0A6YY38 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-42A0A0A6YY38 Gm7367-201ENSMUST00000057611 492 ntBASIC16.12■□□□□ 0.17
Ighv1-42A0A0A6YY38 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ighv1-42A0A0A6YY38 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-42A0A0A6YY38 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.12■□□□□ 0.17
Ighv1-42A0A0A6YY38 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-42A0A0A6YY38 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-42A0A0A6YY38 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.12■□□□□ 0.17
Ighv1-42A0A0A6YY38 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-42A0A0A6YY38 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-42A0A0A6YY38 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-42A0A0A6YY38 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-42A0A0A6YY38 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-42A0A0A6YY38 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-42A0A0A6YY38 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-42A0A0A6YY38 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
Ighv1-42A0A0A6YY38 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-42A0A0A6YY38 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-42A0A0A6YY38 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC16.11■□□□□ 0.17
Ighv1-42A0A0A6YY38 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-42A0A0A6YY38 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-42A0A0A6YY38 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-42A0A0A6YY38 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-42A0A0A6YY38 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ighv1-42A0A0A6YY38 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-42A0A0A6YY38 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Ighv1-42A0A0A6YY38 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Ighv1-42A0A0A6YY38 Gm25016-201ENSMUST00000158399 131 ntBASIC16.11■□□□□ 0.17
Ighv1-42A0A0A6YY38 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ighv1-42A0A0A6YY38 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.11■□□□□ 0.17
Ighv1-42A0A0A6YY38 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC16.11■□□□□ 0.17
Ighv1-42A0A0A6YY38 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-42A0A0A6YY38 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-42A0A0A6YY38 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-42A0A0A6YY38 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-42A0A0A6YY38 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-42A0A0A6YY38 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-42A0A0A6YY38 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-42A0A0A6YY38 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-42A0A0A6YY38 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-42A0A0A6YY38 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-42A0A0A6YY38 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
Ighv1-42A0A0A6YY38 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-42A0A0A6YY38 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-42A0A0A6YY38 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-42A0A0A6YY38 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms