Protein–RNA interactions for Protein: A0A0A6YXN8

Sirpb1b, Signal-regulatory protein beta 1B, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1bA0A0A6YXN8 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sirpb1bA0A0A6YXN8 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC15.47■□□□□ 0.07
Sirpb1bA0A0A6YXN8 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC15.47■□□□□ 0.07
Sirpb1bA0A0A6YXN8 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.47■□□□□ 0.07
Sirpb1bA0A0A6YXN8 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sirpb1bA0A0A6YXN8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sirpb1bA0A0A6YXN8 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sirpb1bA0A0A6YXN8 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sirpb1bA0A0A6YXN8 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sirpb1bA0A0A6YXN8 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Sirpb1bA0A0A6YXN8 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Sirpb1bA0A0A6YXN8 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.47■□□□□ 0.07
Sirpb1bA0A0A6YXN8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sirpb1bA0A0A6YXN8 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sirpb1bA0A0A6YXN8 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Sirpb1bA0A0A6YXN8 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sirpb1bA0A0A6YXN8 Gm43808-201ENSMUST00000202534 2065 ntBASIC15.47■□□□□ 0.07
Sirpb1bA0A0A6YXN8 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sirpb1bA0A0A6YXN8 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Sirpb1bA0A0A6YXN8 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sirpb1bA0A0A6YXN8 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sirpb1bA0A0A6YXN8 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sirpb1bA0A0A6YXN8 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sirpb1bA0A0A6YXN8 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sirpb1bA0A0A6YXN8 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC15.46■□□□□ 0.07
Sirpb1bA0A0A6YXN8 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Sirpb1bA0A0A6YXN8 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sirpb1bA0A0A6YXN8 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
Sirpb1bA0A0A6YXN8 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.46■□□□□ 0.07
Sirpb1bA0A0A6YXN8 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC15.46■□□□□ 0.07
Sirpb1bA0A0A6YXN8 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sirpb1bA0A0A6YXN8 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sirpb1bA0A0A6YXN8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sirpb1bA0A0A6YXN8 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Sirpb1bA0A0A6YXN8 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sirpb1bA0A0A6YXN8 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.45■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC15.45■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Gm6576-201ENSMUST00000169678 883 ntBASIC15.45■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.45■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.45■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC15.44■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sirpb1bA0A0A6YXN8 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.44■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC15.44■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Gm26971-201ENSMUST00000182423 1072 ntBASIC15.44■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.44■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Sirpb1bA0A0A6YXN8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC15.44■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Gm5643-201ENSMUST00000117081 966 ntBASIC15.43■□□□□ 0.06
Sirpb1bA0A0A6YXN8 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.43■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.43■□□□□ 0.06
Sirpb1bA0A0A6YXN8 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sirpb1bA0A0A6YXN8 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Sirpb1bA0A0A6YXN8 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms