Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Gm16061-201ENSMUST00000122167 857 ntBASIC16.14■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Ighv1-43A0A0A6YXN5 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.13■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Gm13474-201ENSMUST00000122466 815 ntBASIC16.13■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.13■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.13■□□□□ 0.17
Ighv1-43A0A0A6YXN5 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-43A0A0A6YXN5 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC16.13■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.12■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.12■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Gm10013-201ENSMUST00000106074 672 ntBASIC16.12■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Gm17661-201ENSMUST00000170317 270 ntBASIC16.12■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Gm18032-201ENSMUST00000222541 538 ntBASIC16.12■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-43A0A0A6YXN5 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Gm6659-201ENSMUST00000174752 547 ntBASIC16.11■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.11■□□□□ 0.17
Ighv1-43A0A0A6YXN5 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.11■□□□□ 0.17
Ighv1-43A0A0A6YXN5 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.11■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.1■□□□□ 0.17
Ighv1-43A0A0A6YXN5 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.1■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.1■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC16.1■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.1■□□□□ 0.17
Ighv1-43A0A0A6YXN5 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Ighv1-43A0A0A6YXN5 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms