Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbc1A0A0A6YWV4 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbc1A0A0A6YWV4 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbc1A0A0A6YWV4 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbc1A0A0A6YWV4 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.04■□□□□ 0.16
Trbc1A0A0A6YWV4 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Trbc1A0A0A6YWV4 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbc1A0A0A6YWV4 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
Trbc1A0A0A6YWV4 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trbc1A0A0A6YWV4 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trbc1A0A0A6YWV4 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbc1A0A0A6YWV4 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbc1A0A0A6YWV4 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbc1A0A0A6YWV4 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbc1A0A0A6YWV4 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.03■□□□□ 0.16
Trbc1A0A0A6YWV4 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.03■□□□□ 0.16
Trbc1A0A0A6YWV4 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbc1A0A0A6YWV4 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbc1A0A0A6YWV4 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbc1A0A0A6YWV4 Gm10418-201ENSMUST00000100943 576 ntBASIC16.03■□□□□ 0.16
Trbc1A0A0A6YWV4 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Trbc1A0A0A6YWV4 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbc1A0A0A6YWV4 Gm42545-201ENSMUST00000202755 922 ntBASIC16.03■□□□□ 0.16
Trbc1A0A0A6YWV4 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbc1A0A0A6YWV4 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbc1A0A0A6YWV4 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Trbc1A0A0A6YWV4 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbc1A0A0A6YWV4 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.03■□□□□ 0.16
Trbc1A0A0A6YWV4 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trbc1A0A0A6YWV4 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbc1A0A0A6YWV4 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.03■□□□□ 0.16
Trbc1A0A0A6YWV4 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbc1A0A0A6YWV4 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trbc1A0A0A6YWV4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbc1A0A0A6YWV4 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbc1A0A0A6YWV4 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbc1A0A0A6YWV4 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbc1A0A0A6YWV4 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC16.02■□□□□ 0.16
Trbc1A0A0A6YWV4 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbc1A0A0A6YWV4 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trbc1A0A0A6YWV4 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC16.02■□□□□ 0.16
Trbc1A0A0A6YWV4 Gm11643-201ENSMUST00000119578 864 ntBASIC16.02■□□□□ 0.16
Trbc1A0A0A6YWV4 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.02■□□□□ 0.16
Trbc1A0A0A6YWV4 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.02■□□□□ 0.16
Trbc1A0A0A6YWV4 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.02■□□□□ 0.16
Trbc1A0A0A6YWV4 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC16.02■□□□□ 0.16
Trbc1A0A0A6YWV4 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.02■□□□□ 0.16
Trbc1A0A0A6YWV4 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.02■□□□□ 0.16
Trbc1A0A0A6YWV4 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Trbc1A0A0A6YWV4 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trbc1A0A0A6YWV4 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trbc1A0A0A6YWV4 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trbc1A0A0A6YWV4 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trbc1A0A0A6YWV4 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trbc1A0A0A6YWV4 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trbc1A0A0A6YWV4 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbc1A0A0A6YWV4 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Trbc1A0A0A6YWV4 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
Trbc1A0A0A6YWV4 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbc1A0A0A6YWV4 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbc1A0A0A6YWV4 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbc1A0A0A6YWV4 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbc1A0A0A6YWV4 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trbc1A0A0A6YWV4 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
Trbc1A0A0A6YWV4 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Trbc1A0A0A6YWV4 Gm12382-201ENSMUST00000122005 922 ntBASIC16.01■□□□□ 0.15
Trbc1A0A0A6YWV4 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.01■□□□□ 0.15
Trbc1A0A0A6YWV4 Gm43183-201ENSMUST00000200632 547 ntBASIC16.01■□□□□ 0.15
Trbc1A0A0A6YWV4 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbc1A0A0A6YWV4 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbc1A0A0A6YWV4 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Trbc1A0A0A6YWV4 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Trbc1A0A0A6YWV4 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.01■□□□□ 0.15
Trbc1A0A0A6YWV4 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbc1A0A0A6YWV4 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trbc1A0A0A6YWV4 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trbc1A0A0A6YWV4 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trbc1A0A0A6YWV4 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trbc1A0A0A6YWV4 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbc1A0A0A6YWV4 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbc1A0A0A6YWV4 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbc1A0A0A6YWV4 Gm6576-201ENSMUST00000169678 883 ntBASIC16■□□□□ 0.15
Trbc1A0A0A6YWV4 Gm37292-201ENSMUST00000192062 758 ntBASIC16■□□□□ 0.15
Trbc1A0A0A6YWV4 AC166341.7-201ENSMUST00000221698 126 ntBASIC16■□□□□ 0.15
Trbc1A0A0A6YWV4 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbc1A0A0A6YWV4 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbc1A0A0A6YWV4 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Trbc1A0A0A6YWV4 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16■□□□□ 0.15
Trbc1A0A0A6YWV4 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbc1A0A0A6YWV4 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
Trbc1A0A0A6YWV4 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trbc1A0A0A6YWV4 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
Trbc1A0A0A6YWV4 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trbc1A0A0A6YWV4 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Trbc1A0A0A6YWV4 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16■□□□□ 0.15
Trbc1A0A0A6YWV4 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Trbc1A0A0A6YWV4 AC124581.1-201ENSMUST00000225416 1399 ntBASIC16■□□□□ 0.15
Trbc1A0A0A6YWV4 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Trbc1A0A0A6YWV4 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Trbc1A0A0A6YWV4 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC15.99■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms