Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Trav6d-5A0A075B6B9 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6d-5A0A075B6B9 Gm9988-201ENSMUST00000069786 435 ntBASIC14.15□□□□□ -0.14
Trav6d-5A0A075B6B9 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trav6d-5A0A075B6B9 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6d-5A0A075B6B9 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trav6d-5A0A075B6B9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
Trav6d-5A0A075B6B9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-5A0A075B6B9 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trav6d-5A0A075B6B9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-5A0A075B6B9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-5A0A075B6B9 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav6d-5A0A075B6B9 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trav6d-5A0A075B6B9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.14□□□□□ -0.15
Trav6d-5A0A075B6B9 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.14□□□□□ -0.15
Trav6d-5A0A075B6B9 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-5A0A075B6B9 Gm10418-201ENSMUST00000100943 576 ntBASIC14.14□□□□□ -0.15
Trav6d-5A0A075B6B9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trav6d-5A0A075B6B9 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
Trav6d-5A0A075B6B9 Gm12821-201ENSMUST00000120022 600 ntBASIC14.14□□□□□ -0.15
Trav6d-5A0A075B6B9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trav6d-5A0A075B6B9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-5A0A075B6B9 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-5A0A075B6B9 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-5A0A075B6B9 Gm8839-201ENSMUST00000121279 1645 ntBASIC14.14□□□□□ -0.15
Trav6d-5A0A075B6B9 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-5A0A075B6B9 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Trav6d-5A0A075B6B9 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trav6d-5A0A075B6B9 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6d-5A0A075B6B9 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6d-5A0A075B6B9 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6d-5A0A075B6B9 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6d-5A0A075B6B9 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trav6d-5A0A075B6B9 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6d-5A0A075B6B9 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6d-5A0A075B6B9 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC14.13□□□□□ -0.15
Trav6d-5A0A075B6B9 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6d-5A0A075B6B9 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6d-5A0A075B6B9 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6d-5A0A075B6B9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6d-5A0A075B6B9 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6d-5A0A075B6B9 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6d-5A0A075B6B9 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Trav6d-5A0A075B6B9 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-5A0A075B6B9 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-5A0A075B6B9 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-5A0A075B6B9 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-5A0A075B6B9 Gm43034-201ENSMUST00000198678 1364 ntBASIC14.12□□□□□ -0.15
Trav6d-5A0A075B6B9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-5A0A075B6B9 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-5A0A075B6B9 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.12□□□□□ -0.15
Trav6d-5A0A075B6B9 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trav6d-5A0A075B6B9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-5A0A075B6B9 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Trav6d-5A0A075B6B9 Gm43017-201ENSMUST00000198296 752 ntBASIC14.12□□□□□ -0.15
Trav6d-5A0A075B6B9 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC14.12□□□□□ -0.15
Trav6d-5A0A075B6B9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-5A0A075B6B9 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trav6d-5A0A075B6B9 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-5A0A075B6B9 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-5A0A075B6B9 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-5A0A075B6B9 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-5A0A075B6B9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-5A0A075B6B9 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-5A0A075B6B9 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-5A0A075B6B9 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6d-5A0A075B6B9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav6d-5A0A075B6B9 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-5A0A075B6B9 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-5A0A075B6B9 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-5A0A075B6B9 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-5A0A075B6B9 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-5A0A075B6B9 Gm11620-201ENSMUST00000118770 1845 ntBASIC14.11□□□□□ -0.15
Trav6d-5A0A075B6B9 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-5A0A075B6B9 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-5A0A075B6B9 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.11□□□□□ -0.15
Trav6d-5A0A075B6B9 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.11□□□□□ -0.15
Trav6d-5A0A075B6B9 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-5A0A075B6B9 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-5A0A075B6B9 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav6d-5A0A075B6B9 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC14.11□□□□□ -0.15
Trav6d-5A0A075B6B9 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav6d-5A0A075B6B9 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-5A0A075B6B9 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-5A0A075B6B9 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-5A0A075B6B9 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-5A0A075B6B9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav6d-5A0A075B6B9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trav6d-5A0A075B6B9 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-5A0A075B6B9 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-5A0A075B6B9 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-5A0A075B6B9 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-5A0A075B6B9 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-5A0A075B6B9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-5A0A075B6B9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-5A0A075B6B9 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-5A0A075B6B9 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6d-5A0A075B6B9 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-5A0A075B6B9 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6d-5A0A075B6B9 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms