Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6n-6A0A075B6B2 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Trav6n-6A0A075B6B2 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav6n-6A0A075B6B2 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6n-6A0A075B6B2 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6n-6A0A075B6B2 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6n-6A0A075B6B2 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6n-6A0A075B6B2 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6n-6A0A075B6B2 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6n-6A0A075B6B2 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6n-6A0A075B6B2 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6n-6A0A075B6B2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6n-6A0A075B6B2 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Trav6n-6A0A075B6B2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6n-6A0A075B6B2 Gm10849-201ENSMUST00000100397 618 ntBASIC13.03□□□□□ -0.32
Trav6n-6A0A075B6B2 Gm27405-201ENSMUST00000184201 112 ntBASIC13.03□□□□□ -0.32
Trav6n-6A0A075B6B2 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6n-6A0A075B6B2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6n-6A0A075B6B2 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6n-6A0A075B6B2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.03□□□□□ -0.32
Trav6n-6A0A075B6B2 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6n-6A0A075B6B2 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6n-6A0A075B6B2 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6n-6A0A075B6B2 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Trav6n-6A0A075B6B2 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6n-6A0A075B6B2 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6n-6A0A075B6B2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Trav6n-6A0A075B6B2 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6n-6A0A075B6B2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6n-6A0A075B6B2 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6n-6A0A075B6B2 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6n-6A0A075B6B2 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6n-6A0A075B6B2 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6n-6A0A075B6B2 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav6n-6A0A075B6B2 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6n-6A0A075B6B2 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC13.02□□□□□ -0.33
Trav6n-6A0A075B6B2 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC13.02□□□□□ -0.33
Trav6n-6A0A075B6B2 Gm13534-201ENSMUST00000121169 513 ntBASIC13.02□□□□□ -0.33
Trav6n-6A0A075B6B2 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Trav6n-6A0A075B6B2 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.02□□□□□ -0.33
Trav6n-6A0A075B6B2 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6n-6A0A075B6B2 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6n-6A0A075B6B2 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6n-6A0A075B6B2 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6n-6A0A075B6B2 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6n-6A0A075B6B2 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6n-6A0A075B6B2 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trav6n-6A0A075B6B2 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trav6n-6A0A075B6B2 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6n-6A0A075B6B2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav6n-6A0A075B6B2 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6n-6A0A075B6B2 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6n-6A0A075B6B2 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav6n-6A0A075B6B2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6n-6A0A075B6B2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6n-6A0A075B6B2 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6n-6A0A075B6B2 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav6n-6A0A075B6B2 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6n-6A0A075B6B2 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Trav6n-6A0A075B6B2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6n-6A0A075B6B2 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC13.01□□□□□ -0.33
Trav6n-6A0A075B6B2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav6n-6A0A075B6B2 Ap3s1-204ENSMUST00000225520 957 ntBASIC13.01□□□□□ -0.33
Trav6n-6A0A075B6B2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6n-6A0A075B6B2 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav6n-6A0A075B6B2 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6n-6A0A075B6B2 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC13.01□□□□□ -0.33
Trav6n-6A0A075B6B2 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6n-6A0A075B6B2 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6n-6A0A075B6B2 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6n-6A0A075B6B2 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Trav6n-6A0A075B6B2 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav6n-6A0A075B6B2 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6n-6A0A075B6B2 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6n-6A0A075B6B2 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav6n-6A0A075B6B2 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6n-6A0A075B6B2 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6n-6A0A075B6B2 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6n-6A0A075B6B2 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6n-6A0A075B6B2 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6n-6A0A075B6B2 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6n-6A0A075B6B2 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC13□□□□□ -0.33
Trav6n-6A0A075B6B2 Gm7291-201ENSMUST00000199147 382 ntBASIC13□□□□□ -0.33
Trav6n-6A0A075B6B2 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC13□□□□□ -0.33
Trav6n-6A0A075B6B2 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6n-6A0A075B6B2 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC13□□□□□ -0.33
Trav6n-6A0A075B6B2 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6n-6A0A075B6B2 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6n-6A0A075B6B2 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6n-6A0A075B6B2 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6n-6A0A075B6B2 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6n-6A0A075B6B2 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav6n-6A0A075B6B2 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6n-6A0A075B6B2 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav6n-6A0A075B6B2 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-6A0A075B6B2 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav6n-6A0A075B6B2 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-6A0A075B6B2 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav6n-6A0A075B6B2 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC12.99□□□□□ -0.33
Trav6n-6A0A075B6B2 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms