Protein–RNA interactions for Protein: A0A075B645

Trav14n-3, T cell receptor alpha variable 14N-3 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav14n-3A0A075B645 Gm26917-202ENSMUST00000192833 3329 ntBASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 Gm12922-201ENSMUST00000120626 809 ntBASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav14n-3A0A075B645 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav14n-3A0A075B645 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav14n-3A0A075B645 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav14n-3A0A075B645 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav14n-3A0A075B645 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav14n-3A0A075B645 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Trav14n-3A0A075B645 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav14n-3A0A075B645 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav14n-3A0A075B645 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav14n-3A0A075B645 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav14n-3A0A075B645 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Trav14n-3A0A075B645 Gm43137-201ENSMUST00000198052 594 ntBASIC13.22□□□□□ -0.29
Trav14n-3A0A075B645 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav14n-3A0A075B645 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav14n-3A0A075B645 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav14n-3A0A075B645 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav14n-3A0A075B645 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav14n-3A0A075B645 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trav14n-3A0A075B645 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav14n-3A0A075B645 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav14n-3A0A075B645 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav14n-3A0A075B645 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav14n-3A0A075B645 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav14n-3A0A075B645 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav14n-3A0A075B645 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav14n-3A0A075B645 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav14n-3A0A075B645 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav14n-3A0A075B645 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav14n-3A0A075B645 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav14n-3A0A075B645 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav14n-3A0A075B645 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav14n-3A0A075B645 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav14n-3A0A075B645 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav14n-3A0A075B645 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav14n-3A0A075B645 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav14n-3A0A075B645 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav14n-3A0A075B645 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav14n-3A0A075B645 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav14n-3A0A075B645 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav14n-3A0A075B645 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav14n-3A0A075B645 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav14n-3A0A075B645 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav14n-3A0A075B645 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav14n-3A0A075B645 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav14n-3A0A075B645 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav14n-3A0A075B645 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav14n-3A0A075B645 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav14n-3A0A075B645 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav14n-3A0A075B645 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav14n-3A0A075B645 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
Trav14n-3A0A075B645 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Trav14n-3A0A075B645 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Trav14n-3A0A075B645 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav14n-3A0A075B645 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav14n-3A0A075B645 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Trav14n-3A0A075B645 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav14n-3A0A075B645 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav14n-3A0A075B645 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav14n-3A0A075B645 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav14n-3A0A075B645 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav14n-3A0A075B645 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav14n-3A0A075B645 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Trav14n-3A0A075B645 CT010478.1-201ENSMUST00000220747 2787 ntBASIC13.2□□□□□ -0.3
Trav14n-3A0A075B645 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Trav14n-3A0A075B645 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms