Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-1A0A075B644 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-1A0A075B644 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-1A0A075B644 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-1A0A075B644 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav13-1A0A075B644 Gm715-201ENSMUST00000117865 831 ntBASIC12.45□□□□□ -0.42
Trav13-1A0A075B644 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC12.45□□□□□ -0.42
Trav13-1A0A075B644 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-1A0A075B644 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-1A0A075B644 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-1A0A075B644 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav13-1A0A075B644 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Trav13-1A0A075B644 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-1A0A075B644 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-1A0A075B644 Gm7856-201ENSMUST00000117514 1493 ntBASIC12.45□□□□□ -0.42
Trav13-1A0A075B644 Gm45560-201ENSMUST00000211492 1472 ntBASIC12.45□□□□□ -0.42
Trav13-1A0A075B644 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav13-1A0A075B644 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-1A0A075B644 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-1A0A075B644 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-1A0A075B644 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-1A0A075B644 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-1A0A075B644 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav13-1A0A075B644 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav13-1A0A075B644 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13-1A0A075B644 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav13-1A0A075B644 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13-1A0A075B644 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13-1A0A075B644 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC12.44□□□□□ -0.42
Trav13-1A0A075B644 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13-1A0A075B644 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13-1A0A075B644 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC12.44□□□□□ -0.42
Trav13-1A0A075B644 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13-1A0A075B644 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13-1A0A075B644 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13-1A0A075B644 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13-1A0A075B644 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13-1A0A075B644 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13-1A0A075B644 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav13-1A0A075B644 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav13-1A0A075B644 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav13-1A0A075B644 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC12.44□□□□□ -0.42
Trav13-1A0A075B644 Gm29241-201ENSMUST00000189260 1096 ntBASIC12.44□□□□□ -0.42
Trav13-1A0A075B644 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Trav13-1A0A075B644 Gm18025-201ENSMUST00000221733 862 ntBASIC12.44□□□□□ -0.42
Trav13-1A0A075B644 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13-1A0A075B644 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13-1A0A075B644 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav13-1A0A075B644 Gm44832-201ENSMUST00000208849 2303 ntBASIC12.44□□□□□ -0.42
Trav13-1A0A075B644 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-1A0A075B644 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-1A0A075B644 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-1A0A075B644 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-1A0A075B644 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-1A0A075B644 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav13-1A0A075B644 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-1A0A075B644 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-1A0A075B644 Gm12382-201ENSMUST00000122005 922 ntBASIC12.43□□□□□ -0.42
Trav13-1A0A075B644 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Trav13-1A0A075B644 Gm43183-201ENSMUST00000200632 547 ntBASIC12.43□□□□□ -0.42
Trav13-1A0A075B644 Gm42545-201ENSMUST00000202755 922 ntBASIC12.43□□□□□ -0.42
Trav13-1A0A075B644 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC12.43□□□□□ -0.42
Trav13-1A0A075B644 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
Trav13-1A0A075B644 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC12.43□□□□□ -0.42
Trav13-1A0A075B644 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-1A0A075B644 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Trav13-1A0A075B644 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-1A0A075B644 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Trav13-1A0A075B644 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
Trav13-1A0A075B644 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13-1A0A075B644 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13-1A0A075B644 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13-1A0A075B644 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13-1A0A075B644 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav13-1A0A075B644 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC12.42□□□□□ -0.42
Trav13-1A0A075B644 Mir6349-201ENSMUST00000184059 97 ntBASIC12.42□□□□□ -0.42
Trav13-1A0A075B644 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC12.42□□□□□ -0.42
Trav13-1A0A075B644 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.42□□□□□ -0.42
Trav13-1A0A075B644 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13-1A0A075B644 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Trav13-1A0A075B644 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13-1A0A075B644 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13-1A0A075B644 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13-1A0A075B644 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13-1A0A075B644 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13-1A0A075B644 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Trav13-1A0A075B644 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13-1A0A075B644 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav13-1A0A075B644 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13-1A0A075B644 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13-1A0A075B644 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav13-1A0A075B644 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13-1A0A075B644 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Trav13-1A0A075B644 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Trav13-1A0A075B644 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Trav13-1A0A075B644 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Trav13-1A0A075B644 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC12.41□□□□□ -0.42
Trav13-1A0A075B644 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC12.41□□□□□ -0.42
Trav13-1A0A075B644 Gm38345-201ENSMUST00000192635 1748 ntBASIC12.41□□□□□ -0.42
Trav13-1A0A075B644 Gm42900-201ENSMUST00000197184 2167 ntBASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms