Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC14.91□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.91□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.9□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC14.9□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.9□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC14.89□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.89□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.88□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Ap3s1-204ENSMUST00000225520 957 ntBASIC14.88□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC14.87□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.87□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC14.87□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC14.86□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav15d-1-dv6d-1A0A075B624 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms