Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-1A0A075B5Z8 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-1A0A075B5Z8 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-1A0A075B5Z8 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-1A0A075B5Z8 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-1A0A075B5Z8 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-1A0A075B5Z8 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-1A0A075B5Z8 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-1A0A075B5Z8 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC14.08□□□□□ -0.16
Trav6-1A0A075B5Z8 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-1A0A075B5Z8 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Trav6-1A0A075B5Z8 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Trav6-1A0A075B5Z8 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-1A0A075B5Z8 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-1A0A075B5Z8 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-1A0A075B5Z8 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-1A0A075B5Z8 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-1A0A075B5Z8 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-1A0A075B5Z8 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-1A0A075B5Z8 Gm45412-201ENSMUST00000210217 2275 ntBASIC14.07□□□□□ -0.16
Trav6-1A0A075B5Z8 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-1A0A075B5Z8 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-1A0A075B5Z8 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-1A0A075B5Z8 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav6-1A0A075B5Z8 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Trav6-1A0A075B5Z8 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav6-1A0A075B5Z8 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-1A0A075B5Z8 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Trav6-1A0A075B5Z8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Trav6-1A0A075B5Z8 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-1A0A075B5Z8 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-1A0A075B5Z8 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-1A0A075B5Z8 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-1A0A075B5Z8 Gm13216-201ENSMUST00000117145 591 ntBASIC14.06□□□□□ -0.16
Trav6-1A0A075B5Z8 Gm7514-201ENSMUST00000209475 934 ntBASIC14.06□□□□□ -0.16
Trav6-1A0A075B5Z8 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.06□□□□□ -0.16
Trav6-1A0A075B5Z8 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-1A0A075B5Z8 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-1A0A075B5Z8 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-1A0A075B5Z8 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-1A0A075B5Z8 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-1A0A075B5Z8 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-1A0A075B5Z8 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-1A0A075B5Z8 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-1A0A075B5Z8 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav6-1A0A075B5Z8 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.06□□□□□ -0.16
Trav6-1A0A075B5Z8 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-1A0A075B5Z8 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trav6-1A0A075B5Z8 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Trav6-1A0A075B5Z8 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-1A0A075B5Z8 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-1A0A075B5Z8 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-1A0A075B5Z8 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-1A0A075B5Z8 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-1A0A075B5Z8 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-1A0A075B5Z8 Gm10493-201ENSMUST00000097270 612 ntBASIC14.05□□□□□ -0.16
Trav6-1A0A075B5Z8 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.05□□□□□ -0.16
Trav6-1A0A075B5Z8 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Trav6-1A0A075B5Z8 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-1A0A075B5Z8 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-1A0A075B5Z8 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav6-1A0A075B5Z8 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.05□□□□□ -0.16
Trav6-1A0A075B5Z8 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Trav6-1A0A075B5Z8 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-1A0A075B5Z8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.04□□□□□ -0.16
Trav6-1A0A075B5Z8 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-1A0A075B5Z8 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-1A0A075B5Z8 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-1A0A075B5Z8 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-1A0A075B5Z8 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-1A0A075B5Z8 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-1A0A075B5Z8 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-1A0A075B5Z8 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trav6-1A0A075B5Z8 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-1A0A075B5Z8 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-1A0A075B5Z8 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Trav6-1A0A075B5Z8 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-1A0A075B5Z8 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-1A0A075B5Z8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-1A0A075B5Z8 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-1A0A075B5Z8 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav6-1A0A075B5Z8 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav6-1A0A075B5Z8 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-1A0A075B5Z8 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-1A0A075B5Z8 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav6-1A0A075B5Z8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-1A0A075B5Z8 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-1A0A075B5Z8 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-1A0A075B5Z8 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-1A0A075B5Z8 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav6-1A0A075B5Z8 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav6-1A0A075B5Z8 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Trav6-1A0A075B5Z8 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.03□□□□□ -0.16
Trav6-1A0A075B5Z8 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC14.03□□□□□ -0.16
Trav6-1A0A075B5Z8 AC099934.2-201ENSMUST00000196389 70 ntBASIC14.03□□□□□ -0.16
Trav6-1A0A075B5Z8 AC156953.1-201ENSMUST00000196953 70 ntBASIC14.03□□□□□ -0.16
Trav6-1A0A075B5Z8 AC157822.2-201ENSMUST00000200291 70 ntBASIC14.03□□□□□ -0.16
Trav6-1A0A075B5Z8 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.03□□□□□ -0.16
Trav6-1A0A075B5Z8 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.03□□□□□ -0.16
Trav6-1A0A075B5Z8 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms