Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm40020-201ENSMUST00000215677 1635 ntBASIC2.03□□□□□ -2.08
Ush2AQ2QI47 AC167250.1-201ENSMUST00000213739 3813 ntBASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Myo3b-203ENSMUST00000112243 6213 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Gm15994-201ENSMUST00000118029 402 ntBASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Hba-ps4-201ENSMUST00000128900 447 ntBASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Gm18828-202ENSMUST00000181035 310 ntBASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Gm37601-201ENSMUST00000194922 394 ntBASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Olfr765-201ENSMUST00000071559 930 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Gm10356-201ENSMUST00000097152 1258 ntBASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
Ush2AQ2QI47 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Postn-203ENSMUST00000107985 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Otud7b-203ENSMUST00000098849 8046 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Lrrc19-202ENSMUST00000107101 2820 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Gm12577-201ENSMUST00000119701 574 ntBASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Gm17131-201ENSMUST00000164420 3846 ntBASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Vmn1r117-201ENSMUST00000166937 924 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Gm5726-201ENSMUST00000173886 924 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Gm8677-201ENSMUST00000174637 924 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Gm6625-201ENSMUST00000177870 272 ntBASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Gm16378-201ENSMUST00000179168 342 ntBASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Gm7870-201ENSMUST00000184467 616 ntBASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Gm8392-201ENSMUST00000185647 835 ntBASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Olfr712-ps1-201ENSMUST00000207690 950 ntBASIC2.03□□□□□ -2.08
Ush2AQ2QI47 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Ush2AQ2QI47 AL672194.1-201ENSMUST00000224841 603 ntBASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Defb21-201ENSMUST00000070722 427 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Gm38057-201ENSMUST00000195551 3203 ntBASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Ush2AQ2QI47 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Mdc1-201ENSMUST00000082337 7335 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Gm37304-201ENSMUST00000193833 2886 ntBASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Gm3962-201ENSMUST00000173027 2587 ntBASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Fbxw23-202ENSMUST00000198480 1388 ntBASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Gm3665-201ENSMUST00000177214 2461 ntBASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Mir291a-201ENSMUST00000104815 82 ntBASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Gm14197-201ENSMUST00000117480 1049 ntBASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Gm12820-201ENSMUST00000119233 342 ntBASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Gm16471-201ENSMUST00000121940 618 ntBASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Gm22156-201ENSMUST00000158409 141 ntBASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Gm20693-201ENSMUST00000177431 211 ntBASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Gm43730-201ENSMUST00000199863 372 ntBASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Gm20177-201ENSMUST00000203705 334 ntBASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Prl4a1-201ENSMUST00000021779 876 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Ush2AQ2QI47 AC166263.1-201ENSMUST00000218586 238 ntBASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Olfr432-202ENSMUST00000213211 4435 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Gm13854-201ENSMUST00000121183 1679 ntBASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Ush2AQ2QI47 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
Ush2AQ2QI47 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
Ush2AQ2QI47 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.09
Ush2AQ2QI47 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC2.03□□□□□ -2.09
Ush2AQ2QI47 Gm14403-202ENSMUST00000108947 1209 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.09
Ush2AQ2QI47 Klrc2-203ENSMUST00000118401 707 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.09
Ush2AQ2QI47 Gm11448-201ENSMUST00000120427 450 ntBASIC2.03□□□□□ -2.09
Ush2AQ2QI47 Gm12087-201ENSMUST00000121878 258 ntBASIC2.03□□□□□ -2.09
Ush2AQ2QI47 Gm24014-201ENSMUST00000157728 157 ntBASIC2.03□□□□□ -2.09
Ush2AQ2QI47 Gm17187-201ENSMUST00000164622 410 ntBASIC2.03□□□□□ -2.09
Ush2AQ2QI47 Skint3-202ENSMUST00000170945 3843 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.09
Ush2AQ2QI47 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC2.03□□□□□ -2.09
Ush2AQ2QI47 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC2.03□□□□□ -2.09
Ush2AQ2QI47 AC123618.1-201ENSMUST00000220174 360 ntBASIC2.03□□□□□ -2.09
Ush2AQ2QI47 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC2.03□□□□□ -2.09
Ush2AQ2QI47 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC2.03□□□□□ -2.09
Ush2AQ2QI47 Cacna1d-202ENSMUST00000112250 8688 ntAPPRIS P4 TSL 1 (best) BASIC2.02□□□□□ -2.09
Ush2AQ2QI47 Gm14849-201ENSMUST00000122293 2846 ntBASIC2.02□□□□□ -2.09
Ush2AQ2QI47 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
Ush2AQ2QI47 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Ush2AQ2QI47 Gm43523-201ENSMUST00000197397 2878 ntBASIC2.02□□□□□ -2.09
Ush2AQ2QI47 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Ush2AQ2QI47 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
Ush2AQ2QI47 Gm42479-201ENSMUST00000198654 1356 ntBASIC2.02□□□□□ -2.09
Ush2AQ2QI47 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC2.02□□□□□ -2.09
Ush2AQ2QI47 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC2.02□□□□□ -2.09
Ush2AQ2QI47 Gm13478-201ENSMUST00000118312 413 ntBASIC2.02□□□□□ -2.09
Ush2AQ2QI47 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC2.02□□□□□ -2.09
Ush2AQ2QI47 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Ush2AQ2QI47 Gm23847-201ENSMUST00000083829 110 ntBASIC2.02□□□□□ -2.09
Ush2AQ2QI47 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
Ush2AQ2QI47 Tdrd3-203ENSMUST00000169504 5280 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
Ush2AQ2QI47 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Ush2AQ2QI47 Gm6367-201ENSMUST00000178646 2464 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Ush2AQ2QI47 Gm3089-201ENSMUST00000200804 1395 ntBASIC2.02□□□□□ -2.09
Ush2AQ2QI47 Gm3302-201ENSMUST00000201462 1395 ntBASIC2.02□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 104.2 ms