Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm34639-201ENSMUST00000222648 2241 ntTSL 5 BASIC5.49□□□□□ -1.53
Sox9Q04887 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC5.49□□□□□ -1.53
Sox9Q04887 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sox9Q04887 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Sox9Q04887 Gm3978-201ENSMUST00000163406 2512 ntBASIC5.49□□□□□ -1.53
Sox9Q04887 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sox9Q04887 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC5.49□□□□□ -1.53
Sox9Q04887 Kdm4c-202ENSMUST00000077851 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sox9Q04887 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Sox9Q04887 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Sox9Q04887 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
Sox9Q04887 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Sox9Q04887 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sox9Q04887 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sox9Q04887 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sox9Q04887 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Sox9Q04887 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sox9Q04887 Vmn1r220-205ENSMUST00000228239 7849 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Sox9Q04887 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sox9Q04887 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Sox9Q04887 Gm2539-201ENSMUST00000180720 2411 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sox9Q04887 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sox9Q04887 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sox9Q04887 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Sox9Q04887 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC5.48□□□□□ -1.53
Sox9Q04887 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sox9Q04887 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Sox9Q04887 Gm29730-201ENSMUST00000192986 1396 ntBASIC5.48□□□□□ -1.53
Sox9Q04887 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Sox9Q04887 Gm22266-201ENSMUST00000104011 138 ntBASIC5.48□□□□□ -1.53
Sox9Q04887 Gm23608-201ENSMUST00000104545 128 ntBASIC5.48□□□□□ -1.53
Sox9Q04887 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Sox9Q04887 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC5.48□□□□□ -1.53
Sox9Q04887 Olfr379-ps1-201ENSMUST00000117349 934 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Sox9Q04887 Gm11881-201ENSMUST00000119408 572 ntBASIC5.48□□□□□ -1.53
Sox9Q04887 Amd-ps1-201ENSMUST00000120127 994 ntBASIC5.48□□□□□ -1.53
Sox9Q04887 Gm14982-201ENSMUST00000121102 442 ntBASIC5.48□□□□□ -1.53
Sox9Q04887 Gm23883-201ENSMUST00000122686 290 ntBASIC5.48□□□□□ -1.53
Sox9Q04887 Gm7568-203ENSMUST00000161626 415 ntTSL 3 BASIC5.48□□□□□ -1.53
Sox9Q04887 Pafah1b1-ps1-201ENSMUST00000181263 1046 ntBASIC5.48□□□□□ -1.53
Sox9Q04887 Gm27036-201ENSMUST00000182465 980 ntBASIC5.48□□□□□ -1.53
Sox9Q04887 Gm27492-201ENSMUST00000185194 187 ntBASIC5.48□□□□□ -1.53
Sox9Q04887 Gm28661-201ENSMUST00000188231 681 ntBASIC5.48□□□□□ -1.53
Sox9Q04887 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sox9Q04887 Gm44961-201ENSMUST00000207450 196 ntBASIC5.48□□□□□ -1.53
Sox9Q04887 Olfr485-201ENSMUST00000208296 954 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Sox9Q04887 CT025680.1-201ENSMUST00000217375 375 ntBASIC5.48□□□□□ -1.53
Sox9Q04887 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC5.48□□□□□ -1.53
Sox9Q04887 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC5.48□□□□□ -1.53
Sox9Q04887 AC153548.2-201ENSMUST00000219770 885 ntBASIC5.48□□□□□ -1.53
Sox9Q04887 AC124420.1-201ENSMUST00000219779 791 ntBASIC5.48□□□□□ -1.53
Sox9Q04887 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC5.48□□□□□ -1.53
Sox9Q04887 AC117237.1-201ENSMUST00000224035 395 ntBASIC5.48□□□□□ -1.53
Sox9Q04887 Acrv1-201ENSMUST00000034620 1101 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sox9Q04887 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sox9Q04887 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Sox9Q04887 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Sox9Q04887 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Sox9Q04887 Gm23875-201ENSMUST00000083711 318 ntBASIC5.48□□□□□ -1.53
Sox9Q04887 Gm38248-201ENSMUST00000193744 5783 ntBASIC5.48□□□□□ -1.53
Sox9Q04887 A230057D06Rik-201ENSMUST00000208961 3026 ntTSL 5 BASIC5.48□□□□□ -1.53
Sox9Q04887 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
Sox9Q04887 AC151971.5-202ENSMUST00000215946 3188 ntTSL 5 BASIC5.48□□□□□ -1.53
Sox9Q04887 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Sox9Q04887 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Sox9Q04887 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sox9Q04887 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sox9Q04887 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sox9Q04887 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sox9Q04887 4921539E11Rik-203ENSMUST00000168664 2356 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sox9Q04887 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sox9Q04887 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC5.48□□□□□ -1.53
Sox9Q04887 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sox9Q04887 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Sox9Q04887 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Sox9Q04887 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox9Q04887 Slc22a30-201ENSMUST00000064507 1888 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Sox9Q04887 Gm10723-201ENSMUST00000195366 6918 ntBASIC5.47□□□□□ -1.53
Sox9Q04887 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Sox9Q04887 Gm44829-201ENSMUST00000208008 3193 ntBASIC5.47□□□□□ -1.53
Sox9Q04887 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
Sox9Q04887 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC5.47□□□□□ -1.53
Sox9Q04887 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC5.47□□□□□ -1.53
Sox9Q04887 Gm12016-201ENSMUST00000119079 681 ntBASIC5.47□□□□□ -1.53
Sox9Q04887 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Sox9Q04887 Gm13677-201ENSMUST00000120739 595 ntBASIC5.47□□□□□ -1.53
Sox9Q04887 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Sox9Q04887 Gm22733-201ENSMUST00000158094 91 ntBASIC5.47□□□□□ -1.53
Sox9Q04887 1700129C05Rik-204ENSMUST00000162674 566 ntAPPRIS ALT2 TSL 3 BASIC5.47□□□□□ -1.53
Sox9Q04887 Gm20519-201ENSMUST00000173684 359 ntBASIC5.47□□□□□ -1.53
Sox9Q04887 Gm23872-201ENSMUST00000175432 77 ntBASIC5.47□□□□□ -1.53
Sox9Q04887 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC5.47□□□□□ -1.53
Sox9Q04887 Gm7438-201ENSMUST00000177664 639 ntBASIC5.47□□□□□ -1.53
Sox9Q04887 Gm7408-201ENSMUST00000178014 639 ntBASIC5.47□□□□□ -1.53
Sox9Q04887 Gm7386-201ENSMUST00000178020 639 ntBASIC5.47□□□□□ -1.53
Sox9Q04887 Gm3657-201ENSMUST00000178170 639 ntBASIC5.47□□□□□ -1.53
Sox9Q04887 Gm7415-201ENSMUST00000178205 639 ntBASIC5.47□□□□□ -1.53
Sox9Q04887 Gm7391-201ENSMUST00000178680 639 ntBASIC5.47□□□□□ -1.53
Sox9Q04887 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC5.47□□□□□ -1.53
Sox9Q04887 Gm28615-201ENSMUST00000187527 482 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 86.6 ms