Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
Col8a1Q00780 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col8a1Q00780 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col8a1Q00780 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Col8a1Q00780 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm13491-201ENSMUST00000118267 235 ntBASIC4.81□□□□□ -1.64
Col8a1Q00780 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm11262-201ENSMUST00000119326 833 ntBASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm8430-201ENSMUST00000119780 471 ntBASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm12115-201ENSMUST00000119969 447 ntBASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm15803-201ENSMUST00000120118 394 ntBASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm14881-201ENSMUST00000120366 372 ntBASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm15428-201ENSMUST00000121352 333 ntBASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm11344-201ENSMUST00000122011 335 ntBASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm22276-201ENSMUST00000122469 129 ntBASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm26256-201ENSMUST00000122499 186 ntBASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col8a1Q00780 1700061F12Rik-201ENSMUST00000132414 876 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm25427-201ENSMUST00000157605 103 ntBASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm9071-201ENSMUST00000165915 474 ntBASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm17121-201ENSMUST00000170414 847 ntBASIC4.81□□□□□ -1.64
Col8a1Q00780 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm20794-201ENSMUST00000177626 628 ntBASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm21850-201ENSMUST00000179792 359 ntBASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm17222-201ENSMUST00000180135 847 ntBASIC4.81□□□□□ -1.64
Col8a1Q00780 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm28973-201ENSMUST00000189310 613 ntBASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm44385-201ENSMUST00000198781 81 ntBASIC4.81□□□□□ -1.64
Col8a1Q00780 AC174780.1-201ENSMUST00000199415 1107 ntBASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm43976-201ENSMUST00000203637 235 ntBASIC4.81□□□□□ -1.64
Col8a1Q00780 AC134333.1-201ENSMUST00000204536 944 ntBASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm44687-201ENSMUST00000204975 235 ntBASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm5318-201ENSMUST00000205249 406 ntBASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm5322-201ENSMUST00000206142 699 ntBASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm45731-201ENSMUST00000211988 1203 ntBASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm8681-201ENSMUST00000219115 618 ntBASIC4.81□□□□□ -1.64
Col8a1Q00780 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm18247-201ENSMUST00000222937 601 ntBASIC4.81□□□□□ -1.64
Col8a1Q00780 AC154510.1-201ENSMUST00000223925 737 ntBASIC4.81□□□□□ -1.64
Col8a1Q00780 AC115878.1-201ENSMUST00000227247 334 ntBASIC4.81□□□□□ -1.64
Col8a1Q00780 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Col8a1Q00780 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col8a1Q00780 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Col8a1Q00780 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC4.81□□□□□ -1.64
Col8a1Q00780 n-R5s37-201ENSMUST00000082533 118 ntBASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm22807-201ENSMUST00000082737 129 ntBASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Col8a1Q00780 Mrgprb3-201ENSMUST00000094383 1009 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Col8a1Q00780 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm44235-201ENSMUST00000204312 3058 ntBASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm37775-201ENSMUST00000194120 2313 ntBASIC4.81□□□□□ -1.64
Col8a1Q00780 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Col8a1Q00780 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col8a1Q00780 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col8a1Q00780 AC117570.1-201ENSMUST00000214015 1886 ntTSL 5 BASIC4.81□□□□□ -1.64
Col8a1Q00780 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col8a1Q00780 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col8a1Q00780 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col8a1Q00780 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
Col8a1Q00780 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col8a1Q00780 Gm18432-201ENSMUST00000195568 1451 ntBASIC4.81□□□□□ -1.64
Col8a1Q00780 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC4.81□□□□□ -1.64
Col8a1Q00780 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Col8a1Q00780 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col8a1Q00780 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col8a1Q00780 Zfp184-205ENSMUST00000176511 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col8a1Q00780 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
Col8a1Q00780 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Col8a1Q00780 Gm38096-201ENSMUST00000193692 2389 ntBASIC4.8□□□□□ -1.64
Col8a1Q00780 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Col8a1Q00780 Gm43781-201ENSMUST00000197634 2681 ntBASIC4.8□□□□□ -1.64
Col8a1Q00780 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Col8a1Q00780 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Col8a1Q00780 Olfr447-202ENSMUST00000216408 3185 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Col8a1Q00780 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
Col8a1Q00780 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC4.8□□□□□ -1.64
Col8a1Q00780 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col8a1Q00780 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Col8a1Q00780 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col8a1Q00780 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col8a1Q00780 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col8a1Q00780 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Col8a1Q00780 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Col8a1Q00780 Gm24160-201ENSMUST00000104594 126 ntBASIC4.8□□□□□ -1.64
Col8a1Q00780 Gm26376-201ENSMUST00000104784 110 ntBASIC4.8□□□□□ -1.64
Col8a1Q00780 Rps11-ps3-201ENSMUST00000117608 486 ntBASIC4.8□□□□□ -1.64
Col8a1Q00780 Gm14679-201ENSMUST00000121536 722 ntBASIC4.8□□□□□ -1.64
Col8a1Q00780 Gm11438-201ENSMUST00000121582 189 ntBASIC4.8□□□□□ -1.64
Col8a1Q00780 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC4.8□□□□□ -1.64
Col8a1Q00780 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC4.8□□□□□ -1.64
Col8a1Q00780 Gm15747-201ENSMUST00000141216 460 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Col8a1Q00780 Gm28039-201ENSMUST00000149128 254 ntTSL 3 BASIC4.8□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms