Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sox1P53783 Gm43363-201ENSMUST00000201590 2647 ntBASIC5.84□□□□□ -1.47
Sox1P53783 Psg-ps1-202ENSMUST00000206181 1943 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sox1P53783 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sox1P53783 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Sox1P53783 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sox1P53783 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Sox1P53783 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Sox1P53783 Gm23274-201ENSMUST00000104056 130 ntBASIC5.84□□□□□ -1.47
Sox1P53783 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC5.84□□□□□ -1.47
Sox1P53783 Gm13009-201ENSMUST00000121307 267 ntBASIC5.84□□□□□ -1.47
Sox1P53783 Gm22960-201ENSMUST00000122517 104 ntBASIC5.84□□□□□ -1.47
Sox1P53783 Gm22208-201ENSMUST00000122658 110 ntBASIC5.84□□□□□ -1.47
Sox1P53783 Gm25294-201ENSMUST00000122791 104 ntBASIC5.84□□□□□ -1.47
Sox1P53783 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sox1P53783 Gm16345-201ENSMUST00000146065 158 ntBASIC5.84□□□□□ -1.47
Sox1P53783 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sox1P53783 Gm22563-201ENSMUST00000157333 269 ntBASIC5.84□□□□□ -1.47
Sox1P53783 Gm25348-201ENSMUST00000158961 111 ntBASIC5.84□□□□□ -1.47
Sox1P53783 Pagr1a-201ENSMUST00000162069 422 ntTSL 3 BASIC5.84□□□□□ -1.47
Sox1P53783 Gm6264-202ENSMUST00000162896 1217 ntBASIC5.84□□□□□ -1.47
Sox1P53783 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sox1P53783 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Sox1P53783 Gm24306-201ENSMUST00000180229 79 ntBASIC5.84□□□□□ -1.47
Sox1P53783 Gm26556-201ENSMUST00000180645 320 ntBASIC5.84□□□□□ -1.47
Sox1P53783 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC5.84□□□□□ -1.47
Sox1P53783 Gm9569-201ENSMUST00000187492 787 ntBASIC5.84□□□□□ -1.47
Sox1P53783 Gm17916-202ENSMUST00000187634 1187 ntBASIC5.84□□□□□ -1.47
Sox1P53783 Gm37093-201ENSMUST00000192515 407 ntTSL 5 BASIC5.84□□□□□ -1.47
Sox1P53783 Gm34176-201ENSMUST00000192621 474 ntBASIC5.84□□□□□ -1.47
Sox1P53783 Trbv9-201ENSMUST00000194494 290 ntBASIC5.84□□□□□ -1.47
Sox1P53783 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC5.84□□□□□ -1.47
Sox1P53783 Gm44060-201ENSMUST00000204440 410 ntBASIC5.84□□□□□ -1.47
Sox1P53783 Gm44134-202ENSMUST00000204777 545 ntBASIC5.84□□□□□ -1.47
Sox1P53783 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC5.84□□□□□ -1.47
Sox1P53783 Gm45048-201ENSMUST00000207058 429 ntBASIC5.84□□□□□ -1.47
Sox1P53783 Gm7786-201ENSMUST00000210494 436 ntBASIC5.84□□□□□ -1.47
Sox1P53783 Gm34096-201ENSMUST00000211296 530 ntTSL 3 BASIC5.84□□□□□ -1.47
Sox1P53783 Gm29785-201ENSMUST00000217033 383 ntBASIC5.84□□□□□ -1.47
Sox1P53783 Gm29818-201ENSMUST00000218070 165 ntBASIC5.84□□□□□ -1.47
Sox1P53783 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC5.84□□□□□ -1.47
Sox1P53783 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC5.84□□□□□ -1.47
Sox1P53783 Fam228b-208ENSMUST00000219898 288 ntAPPRIS ALT2 TSL 3 BASIC5.84□□□□□ -1.47
Sox1P53783 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC5.84□□□□□ -1.47
Sox1P53783 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.84□□□□□ -1.47
Sox1P53783 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Sox1P53783 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Sox1P53783 Olfr825-201ENSMUST00000076814 1159 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Sox1P53783 Defb41-202ENSMUST00000097817 198 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sox1P53783 Pgbd1-201ENSMUST00000099719 3283 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sox1P53783 Gm43924-201ENSMUST00000204851 1736 ntBASIC5.84□□□□□ -1.47
Sox1P53783 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sox1P53783 Cntnap2-202ENSMUST00000114641 9827 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Sox1P53783 Il12rb2-202ENSMUST00000117441 2600 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sox1P53783 Gm45762-201ENSMUST00000212863 2619 ntBASIC5.84□□□□□ -1.47
Sox1P53783 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
Sox1P53783 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Sox1P53783 Ifi207-201ENSMUST00000042610 3422 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.48
Sox1P53783 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
Sox1P53783 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Sox1P53783 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC5.84□□□□□ -1.48
Sox1P53783 Gm40518-202ENSMUST00000214538 4080 ntTSL 5 BASIC5.84□□□□□ -1.48
Sox1P53783 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Sox1P53783 Azin1-201ENSMUST00000065308 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sox1P53783 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sox1P53783 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC5.83□□□□□ -1.48
Sox1P53783 Gm37621-201ENSMUST00000194716 5531 ntBASIC5.83□□□□□ -1.48
Sox1P53783 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC5.83□□□□□ -1.48
Sox1P53783 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Sox1P53783 Dmxl1-201ENSMUST00000041772 12247 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Sox1P53783 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Sox1P53783 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Sox1P53783 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Sox1P53783 Gm22020-201ENSMUST00000104358 136 ntBASIC5.83□□□□□ -1.48
Sox1P53783 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Sox1P53783 Gm14558-201ENSMUST00000117458 381 ntBASIC5.83□□□□□ -1.48
Sox1P53783 Gm13804-201ENSMUST00000119552 172 ntBASIC5.83□□□□□ -1.48
Sox1P53783 Gm14655-201ENSMUST00000120124 578 ntBASIC5.83□□□□□ -1.48
Sox1P53783 Gm13745-201ENSMUST00000121994 527 ntBASIC5.83□□□□□ -1.48
Sox1P53783 Gm13149-201ENSMUST00000122071 339 ntBASIC5.83□□□□□ -1.48
Sox1P53783 Gm25784-201ENSMUST00000122524 81 ntBASIC5.83□□□□□ -1.48
Sox1P53783 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC5.83□□□□□ -1.48
Sox1P53783 Gm4487-201ENSMUST00000150617 442 ntBASIC5.83□□□□□ -1.48
Sox1P53783 Gm24289-201ENSMUST00000157629 135 ntBASIC5.83□□□□□ -1.48
Sox1P53783 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC5.83□□□□□ -1.48
Sox1P53783 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC5.83□□□□□ -1.48
Sox1P53783 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC5.83□□□□□ -1.48
Sox1P53783 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC5.83□□□□□ -1.48
Sox1P53783 Gm27551-201ENSMUST00000184258 77 ntBASIC5.83□□□□□ -1.48
Sox1P53783 1810044D09Rik-201ENSMUST00000186472 486 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Sox1P53783 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Sox1P53783 Trbv12-3-201ENSMUST00000192675 372 ntBASIC5.83□□□□□ -1.48
Sox1P53783 Gm43744-201ENSMUST00000196387 688 ntBASIC5.83□□□□□ -1.48
Sox1P53783 Gm7181-201ENSMUST00000202197 434 ntBASIC5.83□□□□□ -1.48
Sox1P53783 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC5.83□□□□□ -1.48
Sox1P53783 Gm5318-201ENSMUST00000205249 406 ntBASIC5.83□□□□□ -1.48
Sox1P53783 Gm44959-201ENSMUST00000209127 231 ntBASIC5.83□□□□□ -1.48
Sox1P53783 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC5.83□□□□□ -1.48
Sox1P53783 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC5.83□□□□□ -1.48
Sox1P53783 AC153845.2-203ENSMUST00000215889 617 ntTSL 3 BASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 69 ms