Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Cux1P53564 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC5.92□□□□□ -1.46
Cux1P53564 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC5.92□□□□□ -1.46
Cux1P53564 Gm14714-201ENSMUST00000119743 439 ntBASIC5.92□□□□□ -1.46
Cux1P53564 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Cux1P53564 Gm26141-201ENSMUST00000175299 126 ntBASIC5.92□□□□□ -1.46
Cux1P53564 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC5.92□□□□□ -1.46
Cux1P53564 Gm9775-201ENSMUST00000189402 331 ntBASIC5.92□□□□□ -1.46
Cux1P53564 Gm9722-201ENSMUST00000194568 802 ntBASIC5.92□□□□□ -1.46
Cux1P53564 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC5.92□□□□□ -1.46
Cux1P53564 Gm45020-201ENSMUST00000205356 381 ntTSL 3 BASIC5.92□□□□□ -1.46
Cux1P53564 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC5.92□□□□□ -1.46
Cux1P53564 Tas2r115-201ENSMUST00000095394 1033 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Cux1P53564 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Cux1P53564 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
Cux1P53564 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Cux1P53564 Gm29730-201ENSMUST00000192986 1396 ntBASIC5.92□□□□□ -1.46
Cux1P53564 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Cux1P53564 AC147639.2-202ENSMUST00000224834 1545 ntBASIC5.91□□□□□ -1.46
Cux1P53564 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Cux1P53564 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC5.91□□□□□ -1.46
Cux1P53564 Gm37320-201ENSMUST00000192781 4953 ntBASIC5.91□□□□□ -1.46
Cux1P53564 Gm43831-201ENSMUST00000200461 2598 ntBASIC5.91□□□□□ -1.46
Cux1P53564 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Cux1P53564 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC5.91□□□□□ -1.46
Cux1P53564 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
Cux1P53564 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
Cux1P53564 Gm17060-201ENSMUST00000172394 824 ntBASIC5.91□□□□□ -1.46
Cux1P53564 Gm27022-201ENSMUST00000183225 715 ntTSL 3 BASIC5.91□□□□□ -1.46
Cux1P53564 Gm28660-201ENSMUST00000186496 253 ntBASIC5.91□□□□□ -1.46
Cux1P53564 Gm8774-201ENSMUST00000203621 692 ntBASIC5.91□□□□□ -1.46
Cux1P53564 Gm45080-201ENSMUST00000206648 283 ntBASIC5.91□□□□□ -1.46
Cux1P53564 Olfr938-201ENSMUST00000056499 1190 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Cux1P53564 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Cux1P53564 Nxt2-204ENSMUST00000112916 2532 ntTSL 3 BASIC5.91□□□□□ -1.46
Cux1P53564 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC5.91□□□□□ -1.46
Cux1P53564 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Cux1P53564 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Cux1P53564 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Cux1P53564 Mrgprc2-ps-201ENSMUST00000188039 1516 ntBASIC5.91□□□□□ -1.46
Cux1P53564 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
Cux1P53564 Gm24048-201ENSMUST00000102411 106 ntBASIC5.9□□□□□ -1.46
Cux1P53564 Gm23175-201ENSMUST00000104371 132 ntBASIC5.9□□□□□ -1.46
Cux1P53564 Gm11971-201ENSMUST00000117715 288 ntBASIC5.9□□□□□ -1.46
Cux1P53564 Gm11869-201ENSMUST00000118701 329 ntBASIC5.9□□□□□ -1.46
Cux1P53564 Gm13831-201ENSMUST00000118764 302 ntBASIC5.9□□□□□ -1.46
Cux1P53564 Gm11761-201ENSMUST00000121392 445 ntBASIC5.9□□□□□ -1.46
Cux1P53564 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC5.9□□□□□ -1.46
Cux1P53564 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Cux1P53564 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Cux1P53564 Gm18944-201ENSMUST00000207672 643 ntBASIC5.9□□□□□ -1.46
Cux1P53564 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Cux1P53564 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC5.9□□□□□ -1.46
Cux1P53564 Gm25205-201ENSMUST00000082841 103 ntBASIC5.9□□□□□ -1.46
Cux1P53564 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
Cux1P53564 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Cux1P53564 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Cux1P53564 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.46
Cux1P53564 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Cux1P53564 Vmn2r27-201ENSMUST00000100968 2574 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Cux1P53564 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Cux1P53564 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Cux1P53564 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Cux1P53564 Gm29563-201ENSMUST00000187249 496 ntBASIC5.89□□□□□ -1.47
Cux1P53564 Gm29452-201ENSMUST00000187996 313 ntBASIC5.89□□□□□ -1.47
Cux1P53564 Gm28860-201ENSMUST00000188103 313 ntBASIC5.89□□□□□ -1.47
Cux1P53564 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Cux1P53564 Gm10161-201ENSMUST00000091506 204 ntBASIC5.89□□□□□ -1.47
Cux1P53564 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cux1P53564 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cux1P53564 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cux1P53564 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC5.89□□□□□ -1.47
Cux1P53564 Gm16440-201ENSMUST00000100900 1089 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Cux1P53564 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC5.89□□□□□ -1.47
Cux1P53564 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC5.89□□□□□ -1.47
Cux1P53564 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cux1P53564 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC5.89□□□□□ -1.47
Cux1P53564 Gm26476-201ENSMUST00000122618 313 ntBASIC5.89□□□□□ -1.47
Cux1P53564 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Cux1P53564 Gm22310-201ENSMUST00000157509 116 ntBASIC5.89□□□□□ -1.47
Cux1P53564 Gm25066-201ENSMUST00000158145 123 ntBASIC5.89□□□□□ -1.47
Cux1P53564 Gm25835-201ENSMUST00000158917 144 ntBASIC5.89□□□□□ -1.47
Cux1P53564 Gm24976-201ENSMUST00000158972 135 ntBASIC5.89□□□□□ -1.47
Cux1P53564 Gm6264-202ENSMUST00000162896 1217 ntBASIC5.89□□□□□ -1.47
Cux1P53564 Gm27903-201ENSMUST00000175482 126 ntBASIC5.89□□□□□ -1.47
Cux1P53564 Gm26556-201ENSMUST00000180645 320 ntBASIC5.89□□□□□ -1.47
Cux1P53564 Gm36934-201ENSMUST00000192007 306 ntBASIC5.89□□□□□ -1.47
Cux1P53564 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC5.89□□□□□ -1.47
Cux1P53564 Gm44513-201ENSMUST00000206811 439 ntBASIC5.89□□□□□ -1.47
Cux1P53564 AC154441.1-201ENSMUST00000223653 1006 ntBASIC5.89□□□□□ -1.47
Cux1P53564 Gm25630-201ENSMUST00000084000 162 ntBASIC5.89□□□□□ -1.47
Cux1P53564 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Cux1P53564 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Cux1P53564 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC5.88□□□□□ -1.47
Cux1P53564 Gm37345-201ENSMUST00000193062 3138 ntBASIC5.88□□□□□ -1.47
Cux1P53564 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Cux1P53564 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Cux1P53564 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Cux1P53564 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC5.88□□□□□ -1.47
Cux1P53564 Gm23773-201ENSMUST00000158985 296 ntBASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms