Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC4.56□□□□□ -1.68
Col1a1P11087 Gm6264-202ENSMUST00000162896 1217 ntBASIC4.56□□□□□ -1.68
Col1a1P11087 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
Col1a1P11087 Mir3058-201ENSMUST00000175126 91 ntBASIC4.56□□□□□ -1.68
Col1a1P11087 Gm28010-201ENSMUST00000179485 126 ntBASIC4.56□□□□□ -1.68
Col1a1P11087 Gm8816-201ENSMUST00000182280 1163 ntBASIC4.56□□□□□ -1.68
Col1a1P11087 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Col1a1P11087 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Col1a1P11087 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC4.56□□□□□ -1.68
Col1a1P11087 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Col1a1P11087 St8sia4-204ENSMUST00000189556 10027 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Col1a1P11087 Olfr1043-203ENSMUST00000213949 1778 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Col1a1P11087 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Col1a1P11087 CT009733.2-202ENSMUST00000224171 4748 ntBASIC4.55□□□□□ -1.68
Col1a1P11087 Rbm41-204ENSMUST00000113011 3728 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Col1a1P11087 Gm37930-201ENSMUST00000194308 1886 ntBASIC4.55□□□□□ -1.68
Col1a1P11087 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
Col1a1P11087 Gm11262-201ENSMUST00000119326 833 ntBASIC4.55□□□□□ -1.68
Col1a1P11087 Gm8757-201ENSMUST00000119660 372 ntBASIC4.55□□□□□ -1.68
Col1a1P11087 Olfr1397-ps1-201ENSMUST00000121388 962 ntBASIC4.55□□□□□ -1.68
Col1a1P11087 n-R5s201-201ENSMUST00000122622 116 ntBASIC4.55□□□□□ -1.68
Col1a1P11087 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC4.55□□□□□ -1.68
Col1a1P11087 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Col1a1P11087 Gm22310-201ENSMUST00000157509 116 ntBASIC4.55□□□□□ -1.68
Col1a1P11087 Gm29044-201ENSMUST00000188916 283 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Col1a1P11087 Gm29097-201ENSMUST00000190273 422 ntBASIC4.55□□□□□ -1.68
Col1a1P11087 Gm17953-201ENSMUST00000192061 667 ntBASIC4.55□□□□□ -1.68
Col1a1P11087 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC4.55□□□□□ -1.68
Col1a1P11087 Olfr682-ps1-202ENSMUST00000214399 897 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
Col1a1P11087 AC165164.2-201ENSMUST00000220313 392 ntTSL 3 BASIC4.55□□□□□ -1.68
Col1a1P11087 Gm10237-201ENSMUST00000078393 273 ntBASIC4.55□□□□□ -1.68
Col1a1P11087 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC4.55□□□□□ -1.68
Col1a1P11087 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC4.54□□□□□ -1.68
Col1a1P11087 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col1a1P11087 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
Col1a1P11087 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col1a1P11087 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Col1a1P11087 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC4.54□□□□□ -1.68
Col1a1P11087 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC4.54□□□□□ -1.68
Col1a1P11087 Gm11704-201ENSMUST00000120031 214 ntBASIC4.54□□□□□ -1.68
Col1a1P11087 Gm14776-201ENSMUST00000121029 887 ntBASIC4.54□□□□□ -1.68
Col1a1P11087 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC4.54□□□□□ -1.68
Col1a1P11087 Gm24550-201ENSMUST00000158648 279 ntBASIC4.54□□□□□ -1.68
Col1a1P11087 Obox4-ps1-201ENSMUST00000184446 700 ntBASIC4.54□□□□□ -1.68
Col1a1P11087 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC4.54□□□□□ -1.68
Col1a1P11087 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC4.54□□□□□ -1.68
Col1a1P11087 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Col1a1P11087 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC4.54□□□□□ -1.68
Col1a1P11087 AL672194.1-201ENSMUST00000224841 603 ntBASIC4.54□□□□□ -1.68
Col1a1P11087 AC154598.1-201ENSMUST00000227079 347 ntBASIC4.54□□□□□ -1.68
Col1a1P11087 Gm10161-201ENSMUST00000091506 204 ntBASIC4.54□□□□□ -1.68
Col1a1P11087 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Col1a1P11087 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC4.54□□□□□ -1.68
Col1a1P11087 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC4.54□□□□□ -1.68
Col1a1P11087 Gm42728-201ENSMUST00000202644 1552 ntBASIC4.53□□□□□ -1.68
Col1a1P11087 Gm43751-201ENSMUST00000200275 3071 ntBASIC4.53□□□□□ -1.68
Col1a1P11087 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Col1a1P11087 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Col1a1P11087 Gm44527-202ENSMUST00000204519 1314 ntBASIC4.53□□□□□ -1.68
Col1a1P11087 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Col1a1P11087 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Col1a1P11087 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Col1a1P11087 Gm23532-201ENSMUST00000104569 112 ntBASIC4.53□□□□□ -1.68
Col1a1P11087 Gm14973-201ENSMUST00000117248 255 ntBASIC4.53□□□□□ -1.68
Col1a1P11087 Gm12982-201ENSMUST00000117408 190 ntBASIC4.53□□□□□ -1.68
Col1a1P11087 Gm15026-201ENSMUST00000119219 458 ntBASIC4.53□□□□□ -1.68
Col1a1P11087 Gm12577-201ENSMUST00000119701 574 ntBASIC4.53□□□□□ -1.68
Col1a1P11087 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Col1a1P11087 Gm42926-201ENSMUST00000200496 697 ntBASIC4.53□□□□□ -1.68
Col1a1P11087 Gm2189-201ENSMUST00000201419 429 ntBASIC4.53□□□□□ -1.68
Col1a1P11087 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Col1a1P11087 Gm33424-201ENSMUST00000222317 257 ntTSL 5 BASIC4.53□□□□□ -1.68
Col1a1P11087 AC135377.1-201ENSMUST00000223692 463 ntBASIC4.53□□□□□ -1.68
Col1a1P11087 AL645546.1-201ENSMUST00000225001 189 ntBASIC4.53□□□□□ -1.68
Col1a1P11087 Gm25800-201ENSMUST00000082636 134 ntBASIC4.53□□□□□ -1.68
Col1a1P11087 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC4.53□□□□□ -1.68
Col1a1P11087 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC4.53□□□□□ -1.68
Col1a1P11087 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Col1a1P11087 Clca4c-ps-202ENSMUST00000200595 2779 ntBASIC4.52□□□□□ -1.69
Col1a1P11087 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Col1a1P11087 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
Col1a1P11087 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Col1a1P11087 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Col1a1P11087 Gm37195-201ENSMUST00000192006 3018 ntBASIC4.52□□□□□ -1.69
Col1a1P11087 Gemin6-ps-201ENSMUST00000120444 501 ntBASIC4.52□□□□□ -1.69
Col1a1P11087 Gm15926-201ENSMUST00000120492 550 ntBASIC4.52□□□□□ -1.69
Col1a1P11087 Gm22219-201ENSMUST00000157562 319 ntBASIC4.52□□□□□ -1.69
Col1a1P11087 Gm22968-201ENSMUST00000157955 118 ntBASIC4.52□□□□□ -1.69
Col1a1P11087 Gm17210-201ENSMUST00000169975 391 ntTSL 3 BASIC4.52□□□□□ -1.69
Col1a1P11087 Gm9775-201ENSMUST00000189402 331 ntBASIC4.52□□□□□ -1.69
Col1a1P11087 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC4.52□□□□□ -1.69
Col1a1P11087 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Col1a1P11087 Gm25205-201ENSMUST00000082841 103 ntBASIC4.52□□□□□ -1.69
Col1a1P11087 Mir133a-2-201ENSMUST00000083526 104 ntBASIC4.52□□□□□ -1.69
Col1a1P11087 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Col1a1P11087 Gm37250-201ENSMUST00000194919 2388 ntBASIC4.52□□□□□ -1.69
Col1a1P11087 Gm14696-201ENSMUST00000144294 3976 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Col1a1P11087 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
Col1a1P11087 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.52□□□□□ -1.69
Col1a1P11087 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 68.2 ms