Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Mir3473f-201ENSMUST00000183743 136 ntBASIC4.45□□□□□ -1.7
Chmp6P0C0A3 Mir7074-201ENSMUST00000183884 63 ntBASIC4.45□□□□□ -1.7
Chmp6P0C0A3 Gm37490-201ENSMUST00000195566 724 ntBASIC4.45□□□□□ -1.7
Chmp6P0C0A3 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC4.45□□□□□ -1.7
Chmp6P0C0A3 Gm43604-201ENSMUST00000199799 705 ntBASIC4.45□□□□□ -1.7
Chmp6P0C0A3 Gm44681-201ENSMUST00000208447 842 ntBASIC4.45□□□□□ -1.7
Chmp6P0C0A3 Gm18377-201ENSMUST00000215141 607 ntBASIC4.45□□□□□ -1.7
Chmp6P0C0A3 AC173345.3-201ENSMUST00000221245 1093 ntBASIC4.45□□□□□ -1.7
Chmp6P0C0A3 AC156559.1-201ENSMUST00000224158 222 ntBASIC4.45□□□□□ -1.7
Chmp6P0C0A3 AC139750.2-201ENSMUST00000224424 386 ntBASIC4.45□□□□□ -1.7
Chmp6P0C0A3 AC140368.1-202ENSMUST00000226131 658 ntBASIC4.45□□□□□ -1.7
Chmp6P0C0A3 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC4.45□□□□□ -1.7
Chmp6P0C0A3 Gm23407-201ENSMUST00000082538 91 ntBASIC4.45□□□□□ -1.7
Chmp6P0C0A3 Gm10794-201ENSMUST00000099624 207 ntBASIC4.45□□□□□ -1.7
Chmp6P0C0A3 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Chmp6P0C0A3 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Chmp6P0C0A3 Gm42528-201ENSMUST00000200697 3418 ntBASIC4.45□□□□□ -1.7
Chmp6P0C0A3 Gm7452-202ENSMUST00000202891 3039 ntBASIC4.45□□□□□ -1.7
Chmp6P0C0A3 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
Chmp6P0C0A3 B230334C09Rik-201ENSMUST00000200255 8927 ntBASIC4.45□□□□□ -1.7
Chmp6P0C0A3 Gm14062-201ENSMUST00000134795 4134 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Chmp6P0C0A3 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Chmp6P0C0A3 Snord66-201ENSMUST00000104051 75 ntBASIC4.44□□□□□ -1.7
Chmp6P0C0A3 Gm24125-201ENSMUST00000104105 137 ntBASIC4.44□□□□□ -1.7
Chmp6P0C0A3 Gm15785-201ENSMUST00000119145 694 ntBASIC4.44□□□□□ -1.7
Chmp6P0C0A3 Gm4912-201ENSMUST00000122212 1044 ntBASIC4.44□□□□□ -1.7
Chmp6P0C0A3 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Chmp6P0C0A3 Gm23960-201ENSMUST00000157206 131 ntBASIC4.44□□□□□ -1.7
Chmp6P0C0A3 Gm25386-201ENSMUST00000157814 288 ntBASIC4.44□□□□□ -1.7
Chmp6P0C0A3 Gm22314-201ENSMUST00000158007 281 ntBASIC4.44□□□□□ -1.7
Chmp6P0C0A3 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Chmp6P0C0A3 Gm19807-201ENSMUST00000173971 667 ntBASIC4.44□□□□□ -1.7
Chmp6P0C0A3 Gm19898-201ENSMUST00000177490 251 ntBASIC4.44□□□□□ -1.7
Chmp6P0C0A3 Mir6398-201ENSMUST00000184541 102 ntBASIC4.44□□□□□ -1.7
Chmp6P0C0A3 Gm27190-201ENSMUST00000184890 542 ntBASIC4.44□□□□□ -1.7
Chmp6P0C0A3 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC4.44□□□□□ -1.7
Chmp6P0C0A3 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC4.44□□□□□ -1.7
Chmp6P0C0A3 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC4.44□□□□□ -1.7
Chmp6P0C0A3 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC4.44□□□□□ -1.7
Chmp6P0C0A3 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC4.44□□□□□ -1.7
Chmp6P0C0A3 Gm43649-201ENSMUST00000196596 391 ntBASIC4.44□□□□□ -1.7
Chmp6P0C0A3 Gm17951-201ENSMUST00000198536 496 ntBASIC4.44□□□□□ -1.7
Chmp6P0C0A3 Gm44403-201ENSMUST00000198554 129 ntBASIC4.44□□□□□ -1.7
Chmp6P0C0A3 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Chmp6P0C0A3 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.44□□□□□ -1.7
Chmp6P0C0A3 9230110F15Rik-201ENSMUST00000054175 1135 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Chmp6P0C0A3 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Chmp6P0C0A3 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Chmp6P0C0A3 Olfr1253-201ENSMUST00000099765 957 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Chmp6P0C0A3 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Chmp6P0C0A3 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Chmp6P0C0A3 Btbd35f12-201ENSMUST00000178827 1908 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Chmp6P0C0A3 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
Chmp6P0C0A3 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Chmp6P0C0A3 Btbd35f17-201ENSMUST00000105014 1960 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Chmp6P0C0A3 Gm43871-201ENSMUST00000204931 1955 ntBASIC4.44□□□□□ -1.7
Chmp6P0C0A3 Gm45792-201ENSMUST00000207795 4268 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Chmp6P0C0A3 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.43□□□□□ -1.7
Chmp6P0C0A3 Fbxw14-203ENSMUST00000198844 1786 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
Chmp6P0C0A3 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Chmp6P0C0A3 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Chmp6P0C0A3 Gm23319-201ENSMUST00000104467 131 ntBASIC4.43□□□□□ -1.7
Chmp6P0C0A3 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC4.43□□□□□ -1.7
Chmp6P0C0A3 Gm14710-201ENSMUST00000146082 1066 ntBASIC4.43□□□□□ -1.7
Chmp6P0C0A3 Gm23499-201ENSMUST00000157736 268 ntBASIC4.43□□□□□ -1.7
Chmp6P0C0A3 Gm23554-201ENSMUST00000157818 110 ntBASIC4.43□□□□□ -1.7
Chmp6P0C0A3 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC4.43□□□□□ -1.7
Chmp6P0C0A3 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Chmp6P0C0A3 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC4.43□□□□□ -1.7
Chmp6P0C0A3 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC4.43□□□□□ -1.7
Chmp6P0C0A3 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC4.43□□□□□ -1.7
Chmp6P0C0A3 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Chmp6P0C0A3 Gm43730-201ENSMUST00000199863 372 ntBASIC4.43□□□□□ -1.7
Chmp6P0C0A3 Gm45031-201ENSMUST00000206800 288 ntBASIC4.43□□□□□ -1.7
Chmp6P0C0A3 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Chmp6P0C0A3 Gm45727-201ENSMUST00000212886 572 ntBASIC4.43□□□□□ -1.7
Chmp6P0C0A3 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Chmp6P0C0A3 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Chmp6P0C0A3 Gm23928-201ENSMUST00000082469 145 ntBASIC4.43□□□□□ -1.7
Chmp6P0C0A3 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Chmp6P0C0A3 Olfr1221-201ENSMUST00000099795 936 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Chmp6P0C0A3 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
Chmp6P0C0A3 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.43□□□□□ -1.7
Chmp6P0C0A3 Vmn1r82-201ENSMUST00000072801 4784 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Chmp6P0C0A3 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
Chmp6P0C0A3 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Chmp6P0C0A3 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Chmp6P0C0A3 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC4.43□□□□□ -1.7
Chmp6P0C0A3 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Chmp6P0C0A3 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.42□□□□□ -1.7
Chmp6P0C0A3 Gm26019-201ENSMUST00000104407 119 ntBASIC4.42□□□□□ -1.7
Chmp6P0C0A3 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Chmp6P0C0A3 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
Chmp6P0C0A3 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Chmp6P0C0A3 Gm25965-201ENSMUST00000157170 93 ntBASIC4.42□□□□□ -1.7
Chmp6P0C0A3 Gm23958-201ENSMUST00000157207 105 ntBASIC4.42□□□□□ -1.7
Chmp6P0C0A3 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC4.42□□□□□ -1.7
Chmp6P0C0A3 Gm21960-201ENSMUST00000181924 452 ntBASIC4.42□□□□□ -1.7
Chmp6P0C0A3 Gm27976-201ENSMUST00000183635 162 ntBASIC4.42□□□□□ -1.7
Chmp6P0C0A3 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC4.42□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms