Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm14827-201ENSMUST00000146644 3089 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Hoxd3P09027 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Hoxd3P09027 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Hoxd3P09027 Fbln5-203ENSMUST00000222587 2371 ntTSL 5 BASIC5.06□□□□□ -1.6
Hoxd3P09027 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Hoxd3P09027 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Hoxd3P09027 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC5.06□□□□□ -1.6
Hoxd3P09027 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Hoxd3P09027 Tti1-202ENSMUST00000109522 3765 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Hoxd3P09027 6430584L05Rik-201ENSMUST00000204412 3151 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Hoxd3P09027 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Hoxd3P09027 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC5.05□□□□□ -1.6
Hoxd3P09027 Gm43577-201ENSMUST00000197090 3344 ntBASIC5.05□□□□□ -1.6
Hoxd3P09027 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Hoxd3P09027 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Hoxd3P09027 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Hoxd3P09027 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Hoxd3P09027 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Hoxd3P09027 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Hoxd3P09027 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC5.05□□□□□ -1.6
Hoxd3P09027 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC5.05□□□□□ -1.6
Hoxd3P09027 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC5.05□□□□□ -1.6
Hoxd3P09027 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Hoxd3P09027 Pter-203ENSMUST00000134794 3571 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Hoxd3P09027 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC5.05□□□□□ -1.6
Hoxd3P09027 Gm42674-201ENSMUST00000107330 446 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
Hoxd3P09027 Gm11799-201ENSMUST00000116110 460 ntBASIC5.05□□□□□ -1.6
Hoxd3P09027 Gm14018-201ENSMUST00000119042 455 ntBASIC5.05□□□□□ -1.6
Hoxd3P09027 Gm15621-201ENSMUST00000119162 364 ntBASIC5.05□□□□□ -1.6
Hoxd3P09027 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC5.05□□□□□ -1.6
Hoxd3P09027 Gm5384-201ENSMUST00000120313 463 ntBASIC5.05□□□□□ -1.6
Hoxd3P09027 Gm14577-201ENSMUST00000121134 256 ntBASIC5.05□□□□□ -1.6
Hoxd3P09027 Gm13430-201ENSMUST00000121366 288 ntBASIC5.05□□□□□ -1.6
Hoxd3P09027 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC5.05□□□□□ -1.6
Hoxd3P09027 Gm15213-201ENSMUST00000122098 216 ntBASIC5.05□□□□□ -1.6
Hoxd3P09027 Gm14228-201ENSMUST00000131908 798 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Hoxd3P09027 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Hoxd3P09027 Gm22116-201ENSMUST00000158791 141 ntBASIC5.05□□□□□ -1.6
Hoxd3P09027 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Hoxd3P09027 Gm17907-201ENSMUST00000173150 710 ntBASIC5.05□□□□□ -1.6
Hoxd3P09027 Gm23402-201ENSMUST00000178130 107 ntBASIC5.05□□□□□ -1.6
Hoxd3P09027 Gm26189-201ENSMUST00000179879 107 ntBASIC5.05□□□□□ -1.6
Hoxd3P09027 Gm26622-201ENSMUST00000180520 298 ntBASIC5.05□□□□□ -1.6
Hoxd3P09027 Gm18728-201ENSMUST00000186155 753 ntBASIC5.05□□□□□ -1.6
Hoxd3P09027 Halr1-203ENSMUST00000189071 511 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Hoxd3P09027 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Hoxd3P09027 Gm37380-201ENSMUST00000193752 397 ntBASIC5.05□□□□□ -1.6
Hoxd3P09027 Gm44361-201ENSMUST00000197960 94 ntBASIC5.05□□□□□ -1.6
Hoxd3P09027 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC5.05□□□□□ -1.6
Hoxd3P09027 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC5.05□□□□□ -1.6
Hoxd3P09027 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC5.05□□□□□ -1.6
Hoxd3P09027 Gm18600-201ENSMUST00000207205 505 ntBASIC5.05□□□□□ -1.6
Hoxd3P09027 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Hoxd3P09027 Gm18921-201ENSMUST00000221798 366 ntBASIC5.05□□□□□ -1.6
Hoxd3P09027 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Hoxd3P09027 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Hoxd3P09027 Gm21731-201ENSMUST00000079524 489 ntBASIC5.05□□□□□ -1.6
Hoxd3P09027 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Hoxd3P09027 Gm25801-201ENSMUST00000082638 106 ntBASIC5.05□□□□□ -1.6
Hoxd3P09027 Gm23721-201ENSMUST00000083005 107 ntBASIC5.05□□□□□ -1.6
Hoxd3P09027 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Hoxd3P09027 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Hoxd3P09027 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Hoxd3P09027 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Hoxd3P09027 Ms4a4c-201ENSMUST00000072729 1723 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Hoxd3P09027 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Hoxd3P09027 AC022682.2-202ENSMUST00000224394 3943 ntBASIC5.05□□□□□ -1.6
Hoxd3P09027 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Hoxd3P09027 AC152922.2-201ENSMUST00000213353 3879 ntBASIC5.05□□□□□ -1.6
Hoxd3P09027 Npy2r-201ENSMUST00000029633 3364 ntAPPRIS P1 TSL 2 BASIC5.05□□□□□ -1.6
Hoxd3P09027 Rbm46-203ENSMUST00000182818 2115 ntTSL 5 BASIC5.05□□□□□ -1.6
Hoxd3P09027 Rasgrp3-201ENSMUST00000095204 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Hoxd3P09027 Olfr1360-203ENSMUST00000216083 2315 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Hoxd3P09027 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Hoxd3P09027 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC5.04□□□□□ -1.6
Hoxd3P09027 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
Hoxd3P09027 Vmn1r35-204ENSMUST00000227749 2254 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Hoxd3P09027 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Hoxd3P09027 Ifi207-202ENSMUST00000127730 3145 ntAPPRIS ALT2 TSL 2 BASIC5.04□□□□□ -1.6
Hoxd3P09027 Bcas3os1-202ENSMUST00000151652 3138 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Hoxd3P09027 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Hoxd3P09027 Scn2a-202ENSMUST00000100067 8690 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
Hoxd3P09027 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Hoxd3P09027 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Hoxd3P09027 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC5.04□□□□□ -1.6
Hoxd3P09027 Cntn4-201ENSMUST00000079416 2844 ntTSL 5 BASIC5.04□□□□□ -1.6
Hoxd3P09027 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Hoxd3P09027 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
Hoxd3P09027 Slc26a5-202ENSMUST00000115176 2768 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Hoxd3P09027 Igkv10-96-201ENSMUST00000103328 359 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Hoxd3P09027 Iglv3-201ENSMUST00000103751 381 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Hoxd3P09027 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
Hoxd3P09027 Gm11271-201ENSMUST00000116054 440 ntBASIC5.04□□□□□ -1.6
Hoxd3P09027 Gm11920-201ENSMUST00000118491 563 ntBASIC5.04□□□□□ -1.6
Hoxd3P09027 Gm7219-201ENSMUST00000119619 297 ntBASIC5.04□□□□□ -1.6
Hoxd3P09027 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC5.04□□□□□ -1.6
Hoxd3P09027 Gm12181-201ENSMUST00000121448 531 ntBASIC5.04□□□□□ -1.6
Hoxd3P09027 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Hoxd3P09027 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC5.04□□□□□ -1.6
Hoxd3P09027 Gm5263-201ENSMUST00000163646 601 ntBASIC5.04□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms