Protein–RNA interactions for Protein: A4IF42

Gm4559, ENSMUSG00000056885 protein (Fragment), mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4559A4IF42 Zmiz2-203ENSMUST00000109785 3542 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
Gm4559A4IF42 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Gm4559A4IF42 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Gm4559A4IF42 Lama3-202ENSMUST00000188815 5551 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
Gm4559A4IF42 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
Gm4559A4IF42 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Gm4559A4IF42 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Gm4559A4IF42 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC1.18□□□□□ -2.22
Gm4559A4IF42 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
Gm4559A4IF42 Gm43386-201ENSMUST00000199654 4001 ntBASIC1.18□□□□□ -2.22
Gm4559A4IF42 Gm45191-201ENSMUST00000205846 5439 ntBASIC1.18□□□□□ -2.22
Gm4559A4IF42 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
Gm4559A4IF42 A330015K06Rik-201ENSMUST00000195489 4286 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
Gm4559A4IF42 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Gm4559A4IF42 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
Gm4559A4IF42 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Gm38577-201ENSMUST00000221531 4545 ntBASIC1.17□□□□□ -2.22
Gm4559A4IF42 Nedd4l-211ENSMUST00000226058 3393 ntBASIC1.17□□□□□ -2.22
Gm4559A4IF42 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Fam198a-201ENSMUST00000043011 3623 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Camk1g-201ENSMUST00000016323 2469 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Cyld-210ENSMUST00000211554 4638 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC1.17□□□□□ -2.22
Gm4559A4IF42 B430306N03Rik-201ENSMUST00000049614 3996 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Olfr890-202ENSMUST00000213458 5475 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Gm4559A4IF42 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 AC156025.1-201ENSMUST00000223597 3551 ntBASIC1.17□□□□□ -2.22
Gm4559A4IF42 Slc25a44-201ENSMUST00000057935 3577 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Ptprc-207ENSMUST00000183301 5074 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Zfp799-201ENSMUST00000179695 5833 ntTSL 3 BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Ptprm-201ENSMUST00000037974 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Foxj3-202ENSMUST00000106310 4660 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Samhd1-201ENSMUST00000057725 3926 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Stox2-202ENSMUST00000110367 3424 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Cnga3-204ENSMUST00000195272 2197 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Serpinf2-201ENSMUST00000043696 2192 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Gm10461-201ENSMUST00000202073 4786 ntBASIC1.17□□□□□ -2.22
Gm4559A4IF42 Olfr522-201ENSMUST00000050585 4766 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Nfatc1-201ENSMUST00000035800 4505 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 B230354K17Rik-201ENSMUST00000181149 4897 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Vmn1r181-205ENSMUST00000228399 4616 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Sec16b-203ENSMUST00000111700 4369 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Dnaic1-201ENSMUST00000102963 2510 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Lockd-201ENSMUST00000183867 5662 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Adam1a-201ENSMUST00000100757 3496 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Mcf2l-202ENSMUST00000098927 3215 ntTSL 5 BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Gm22231-201ENSMUST00000101027 73 ntBASIC1.17□□□□□ -2.22
Gm4559A4IF42 Gm25679-201ENSMUST00000101973 164 ntBASIC1.17□□□□□ -2.22
Gm4559A4IF42 Gm25594-201ENSMUST00000102274 82 ntBASIC1.17□□□□□ -2.22
Gm4559A4IF42 Mir764-201ENSMUST00000103259 108 ntBASIC1.17□□□□□ -2.22
Gm4559A4IF42 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Gm4559A4IF42 Igkv4-58-201ENSMUST00000103355 292 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 94.7 ms