Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 AC134596.1-201ENSMUST00000222016 1922 ntBASIC4□□□□□ -1.77
Upk3aQ9JKX8 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Upk3aQ9JKX8 Gm13487-201ENSMUST00000122240 864 ntBASIC4□□□□□ -1.77
Upk3aQ9JKX8 Gm15212-201ENSMUST00000122403 466 ntBASIC4□□□□□ -1.77
Upk3aQ9JKX8 4930406D18Rik-202ENSMUST00000152827 657 ntTSL 1 (best) BASIC4□□□□□ -1.77
Upk3aQ9JKX8 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC4□□□□□ -1.77
Upk3aQ9JKX8 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC4□□□□□ -1.77
Upk3aQ9JKX8 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC4□□□□□ -1.77
Upk3aQ9JKX8 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC4□□□□□ -1.77
Upk3aQ9JKX8 Gm28118-201ENSMUST00000185957 294 ntBASIC4□□□□□ -1.77
Upk3aQ9JKX8 Gm28615-201ENSMUST00000187527 482 ntBASIC4□□□□□ -1.77
Upk3aQ9JKX8 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC4□□□□□ -1.77
Upk3aQ9JKX8 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC4□□□□□ -1.77
Upk3aQ9JKX8 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Upk3aQ9JKX8 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC4□□□□□ -1.77
Upk3aQ9JKX8 Gm17780-201ENSMUST00000207142 612 ntBASIC4□□□□□ -1.77
Upk3aQ9JKX8 Gm34272-201ENSMUST00000208886 253 ntBASIC4□□□□□ -1.77
Upk3aQ9JKX8 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC4□□□□□ -1.77
Upk3aQ9JKX8 Gm45689-201ENSMUST00000210522 133 ntBASIC4□□□□□ -1.77
Upk3aQ9JKX8 Gm18487-201ENSMUST00000215826 878 ntBASIC4□□□□□ -1.77
Upk3aQ9JKX8 AC159244.1-201ENSMUST00000220964 594 ntBASIC4□□□□□ -1.77
Upk3aQ9JKX8 Gm46369-201ENSMUST00000221577 401 ntBASIC4□□□□□ -1.77
Upk3aQ9JKX8 AC165283.1-201ENSMUST00000223390 307 ntBASIC4□□□□□ -1.77
Upk3aQ9JKX8 AC151902.1-201ENSMUST00000227800 375 ntBASIC4□□□□□ -1.77
Upk3aQ9JKX8 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Upk3aQ9JKX8 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC4□□□□□ -1.77
Upk3aQ9JKX8 Olfr480-201ENSMUST00000071658 1029 ntBASIC4□□□□□ -1.77
Upk3aQ9JKX8 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC4□□□□□ -1.77
Upk3aQ9JKX8 Gm10115-201ENSMUST00000076071 1228 ntBASIC4□□□□□ -1.77
Upk3aQ9JKX8 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC4□□□□□ -1.77
Upk3aQ9JKX8 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Upk3aQ9JKX8 Olfr993-201ENSMUST00000099926 945 ntAPPRIS P1 BASIC4□□□□□ -1.77
Upk3aQ9JKX8 Gm44435-201ENSMUST00000204379 4119 ntBASIC4□□□□□ -1.77
Upk3aQ9JKX8 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC4□□□□□ -1.77
Upk3aQ9JKX8 Gm43369-201ENSMUST00000196373 1552 ntBASIC4□□□□□ -1.77
Upk3aQ9JKX8 AC135119.1-201ENSMUST00000227935 3717 ntBASIC4□□□□□ -1.77
Upk3aQ9JKX8 AC154548.1-201ENSMUST00000225844 3838 ntBASIC4□□□□□ -1.77
Upk3aQ9JKX8 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Gm44224-201ENSMUST00000204131 1463 ntBASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Gm24067-201ENSMUST00000104514 85 ntBASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Gm15151-201ENSMUST00000117106 177 ntBASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Cyp2j7-ps2-201ENSMUST00000119189 179 ntBASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Gm14991-201ENSMUST00000119913 598 ntBASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Gm14473-201ENSMUST00000122269 557 ntBASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Gm6969-201ENSMUST00000140065 342 ntBASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Gm23499-201ENSMUST00000157736 268 ntBASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Gm24675-201ENSMUST00000158757 259 ntBASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Gm18522-201ENSMUST00000173947 650 ntBASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Mir6996-201ENSMUST00000183922 61 ntBASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Gm27242-201ENSMUST00000184211 1151 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Gm27695-201ENSMUST00000184301 91 ntBASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Gm30280-201ENSMUST00000192214 262 ntBASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Gm43276-201ENSMUST00000199712 364 ntBASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Olfr8-202ENSMUST00000203851 1009 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Gm6230-201ENSMUST00000208077 780 ntBASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Gm45502-201ENSMUST00000209561 252 ntTSL 3 BASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 AC099612.2-201ENSMUST00000226824 721 ntBASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 BC023105-201ENSMUST00000073997 1227 ntBASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Gm3972-201ENSMUST00000173960 2861 ntBASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Olfr510-203ENSMUST00000216331 3101 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Zfp808-201ENSMUST00000099449 2571 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Olfr353-203ENSMUST00000217215 4173 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Upk3aQ9JKX8 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Upk3aQ9JKX8 Gm38212-201ENSMUST00000194081 2756 ntBASIC3.98□□□□□ -1.77
Upk3aQ9JKX8 Gm43668-201ENSMUST00000197014 5342 ntBASIC3.98□□□□□ -1.77
Upk3aQ9JKX8 Zfp984-202ENSMUST00000122309 2405 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Upk3aQ9JKX8 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
Upk3aQ9JKX8 Gm14621-201ENSMUST00000117709 689 ntBASIC3.98□□□□□ -1.77
Upk3aQ9JKX8 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC3.98□□□□□ -1.77
Upk3aQ9JKX8 Gm11350-201ENSMUST00000121436 870 ntBASIC3.98□□□□□ -1.77
Upk3aQ9JKX8 Gm11385-201ENSMUST00000121513 570 ntBASIC3.98□□□□□ -1.77
Upk3aQ9JKX8 Gm12885-201ENSMUST00000122246 328 ntBASIC3.98□□□□□ -1.77
Upk3aQ9JKX8 Gm25177-201ENSMUST00000122634 117 ntBASIC3.98□□□□□ -1.77
Upk3aQ9JKX8 Gm11281-201ENSMUST00000141391 576 ntBASIC3.98□□□□□ -1.77
Upk3aQ9JKX8 Gm26371-201ENSMUST00000157829 104 ntBASIC3.98□□□□□ -1.77
Upk3aQ9JKX8 Gm25713-201ENSMUST00000158625 109 ntBASIC3.98□□□□□ -1.77
Upk3aQ9JKX8 Ipcef1-209ENSMUST00000170680 1174 ntTSL 5 BASIC3.98□□□□□ -1.77
Upk3aQ9JKX8 Gm22646-201ENSMUST00000175130 115 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms