Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm28847-201ENSMUST00000186778 700 ntBASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Gm4322-201ENSMUST00000191094 336 ntBASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Gm37477-201ENSMUST00000195215 884 ntBASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Gm43849-201ENSMUST00000201086 215 ntBASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Ankrd42-207ENSMUST00000207131 1220 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Gm31166-201ENSMUST00000209326 288 ntBASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Gm35453-201ENSMUST00000210304 331 ntTSL 3 BASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Gm7128-201ENSMUST00000211639 533 ntBASIC5.68□□□□□ -1.5
Trim39Q9ESN2 CT485607.3-201ENSMUST00000213361 672 ntBASIC5.68□□□□□ -1.5
Trim39Q9ESN2 AC135353.1-201ENSMUST00000215330 630 ntBASIC5.68□□□□□ -1.5
Trim39Q9ESN2 CT025606.1-201ENSMUST00000218273 324 ntBASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Gm18507-201ENSMUST00000218855 525 ntBASIC5.68□□□□□ -1.5
Trim39Q9ESN2 AC158641.1-201ENSMUST00000218933 229 ntBASIC5.68□□□□□ -1.5
Trim39Q9ESN2 AC125531.1-201ENSMUST00000219849 221 ntBASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Gm18628-201ENSMUST00000220584 475 ntBASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC5.68□□□□□ -1.5
Trim39Q9ESN2 AC211878.1-201ENSMUST00000221668 474 ntBASIC5.68□□□□□ -1.5
Trim39Q9ESN2 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC5.68□□□□□ -1.5
Trim39Q9ESN2 AC154623.1-201ENSMUST00000224348 805 ntBASIC5.68□□□□□ -1.5
Trim39Q9ESN2 AC161609.1-201ENSMUST00000225878 474 ntBASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Gm26439-201ENSMUST00000082592 106 ntBASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Gm25929-201ENSMUST00000082784 107 ntBASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Mir19a-201ENSMUST00000083482 82 ntBASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Trim39Q9ESN2 S100pbp-201ENSMUST00000049081 2769 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Gm26707-201ENSMUST00000181552 3902 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Gm5155-201ENSMUST00000072381 2841 ntBASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Gm9602-201ENSMUST00000163325 2062 ntAPPRIS P5 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Gm8356-201ENSMUST00000163636 2062 ntAPPRIS P5 TSL 5 BASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Gm18360-201ENSMUST00000173327 1524 ntBASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Olfr491-203ENSMUST00000214605 2136 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
Trim39Q9ESN2 AC125532.1-201ENSMUST00000216210 2334 ntBASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Trim39Q9ESN2 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Ktn1-225ENSMUST00000191446 4021 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Homer1-202ENSMUST00000079086 4287 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Malrd1-201ENSMUST00000146205 6738 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Gm23653-201ENSMUST00000116751 97 ntBASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Gm12235-201ENSMUST00000118596 170 ntBASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Gm13338-201ENSMUST00000120235 361 ntBASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Gm13452-201ENSMUST00000120896 1097 ntBASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Gm4852-201ENSMUST00000121202 729 ntBASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Gm22276-201ENSMUST00000122469 129 ntBASIC5.67□□□□□ -1.5
Trim39Q9ESN2 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Cfap61-212ENSMUST00000152515 640 ntTSL 3 BASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Gm22791-201ENSMUST00000157232 145 ntBASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Gm25339-201ENSMUST00000157458 232 ntBASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Gm20523-201ENSMUST00000174340 1124 ntBASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Gm23793-201ENSMUST00000179396 117 ntBASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Gm37603-201ENSMUST00000192368 219 ntBASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Gm37757-201ENSMUST00000193072 210 ntBASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Gm38291-201ENSMUST00000193671 259 ntBASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Gm5694-201ENSMUST00000195648 641 ntBASIC5.67□□□□□ -1.5
Trim39Q9ESN2 AC136146.1-201ENSMUST00000196180 91 ntBASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Gm29778-201ENSMUST00000201667 466 ntBASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Gm43914-201ENSMUST00000203592 594 ntBASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Gm44068-201ENSMUST00000204049 2128 ntBASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Gm8158-201ENSMUST00000219220 465 ntBASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Gm8249-201ENSMUST00000219225 465 ntBASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Gm8112-201ENSMUST00000219637 465 ntBASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Gm9293-201ENSMUST00000223096 306 ntBASIC5.67□□□□□ -1.5
Trim39Q9ESN2 AC125484.1-201ENSMUST00000223218 234 ntBASIC5.67□□□□□ -1.5
Trim39Q9ESN2 AC129085.4-201ENSMUST00000224536 570 ntBASIC5.67□□□□□ -1.5
Trim39Q9ESN2 AC154788.1-201ENSMUST00000225003 340 ntBASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Tnrc6a-201ENSMUST00000094053 8183 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Clca1-201ENSMUST00000029919 3655 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Gm43857-201ENSMUST00000200343 3079 ntBASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Gm15583-201ENSMUST00000116191 3510 ntBASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Gm3453-201ENSMUST00000170686 1756 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Gm37488-201ENSMUST00000195434 3374 ntBASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Galntl6-207ENSMUST00000204067 1592 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Trim39Q9ESN2 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
Trim39Q9ESN2 Gm38277-201ENSMUST00000195172 1367 ntBASIC5.67□□□□□ -1.5
Trim39Q9ESN2 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
Trim39Q9ESN2 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms