Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm32536-201ENSMUST00000205209 445 ntBASIC5.55□□□□□ -1.52
Vps53Q8CCB4 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC5.55□□□□□ -1.52
Vps53Q8CCB4 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Vps53Q8CCB4 AC160972.1-201ENSMUST00000220971 644 ntTSL 2 BASIC5.55□□□□□ -1.52
Vps53Q8CCB4 AC157654.1-201ENSMUST00000224130 820 ntBASIC5.55□□□□□ -1.52
Vps53Q8CCB4 3830408C21Rik-203ENSMUST00000224293 822 ntBASIC5.55□□□□□ -1.52
Vps53Q8CCB4 AC133910.1-201ENSMUST00000228128 624 ntBASIC5.55□□□□□ -1.52
Vps53Q8CCB4 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Vps53Q8CCB4 Mir338-201ENSMUST00000083666 98 ntBASIC5.55□□□□□ -1.52
Vps53Q8CCB4 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Vps53Q8CCB4 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Vps53Q8CCB4 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Vps53Q8CCB4 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Vps53Q8CCB4 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC5.55□□□□□ -1.52
Vps53Q8CCB4 Zfp808-204ENSMUST00000221772 1379 ntTSL 5 BASIC5.55□□□□□ -1.52
Vps53Q8CCB4 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Gm45378-201ENSMUST00000211063 2711 ntBASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Vps53Q8CCB4 AC190403.1-201ENSMUST00000224515 1325 ntBASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Gm6710-202ENSMUST00000109012 1665 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Gm14391-206ENSMUST00000165892 1665 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Gm14898-201ENSMUST00000120202 645 ntBASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Gm15141-201ENSMUST00000121860 729 ntBASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Gm7840-201ENSMUST00000122086 533 ntBASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Gm13194-201ENSMUST00000142299 311 ntBASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Snora81-201ENSMUST00000157310 178 ntBASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Gm24113-201ENSMUST00000157477 276 ntBASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Gm24198-201ENSMUST00000157812 108 ntBASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Gm22789-201ENSMUST00000157884 130 ntBASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Gm24931-201ENSMUST00000158324 107 ntBASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Gm16236-201ENSMUST00000159588 379 ntBASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Gm19898-201ENSMUST00000177490 251 ntBASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Gm25598-201ENSMUST00000179031 107 ntBASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Gm21850-201ENSMUST00000179792 359 ntBASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Gm27286-201ENSMUST00000184934 179 ntBASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Gm37243-201ENSMUST00000193407 595 ntBASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Gm18340-201ENSMUST00000196342 609 ntBASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Gm17987-201ENSMUST00000206902 603 ntBASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Vps53Q8CCB4 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC5.54□□□□□ -1.52
Vps53Q8CCB4 AC155305.1-201ENSMUST00000222207 319 ntBASIC5.54□□□□□ -1.52
Vps53Q8CCB4 AC129935.1-201ENSMUST00000226302 873 ntBASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Pglyrp3-201ENSMUST00000047660 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Vps53Q8CCB4 n-R5s196-201ENSMUST00000083136 117 ntBASIC5.54□□□□□ -1.52
Vps53Q8CCB4 n-R5s85-201ENSMUST00000083453 113 ntBASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Gm20679-201ENSMUST00000177285 1402 ntBASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Gm5746-201ENSMUST00000183550 2200 ntBASIC5.54□□□□□ -1.52
Vps53Q8CCB4 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Vps53Q8CCB4 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Vps53Q8CCB4 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Vps53Q8CCB4 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Vps53Q8CCB4 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Vps53Q8CCB4 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Vps53Q8CCB4 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC5.53□□□□□ -1.52
Vps53Q8CCB4 Gm14939-201ENSMUST00000120347 680 ntBASIC5.53□□□□□ -1.52
Vps53Q8CCB4 Gm11584-201ENSMUST00000120636 325 ntBASIC5.53□□□□□ -1.52
Vps53Q8CCB4 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC5.53□□□□□ -1.52
Vps53Q8CCB4 Gm23906-201ENSMUST00000157573 128 ntBASIC5.53□□□□□ -1.52
Vps53Q8CCB4 Gm24532-201ENSMUST00000157951 286 ntBASIC5.53□□□□□ -1.52
Vps53Q8CCB4 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Vps53Q8CCB4 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Vps53Q8CCB4 Gm27690-201ENSMUST00000184596 126 ntBASIC5.53□□□□□ -1.52
Vps53Q8CCB4 Gm5372-201ENSMUST00000187540 409 ntBASIC5.53□□□□□ -1.52
Vps53Q8CCB4 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Vps53Q8CCB4 Gm29460-201ENSMUST00000188607 714 ntBASIC5.53□□□□□ -1.52
Vps53Q8CCB4 Gm21735-201ENSMUST00000190360 696 ntBASIC5.53□□□□□ -1.52
Vps53Q8CCB4 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC5.53□□□□□ -1.52
Vps53Q8CCB4 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC5.53□□□□□ -1.52
Vps53Q8CCB4 Gm10292-202ENSMUST00000193165 585 ntBASIC5.53□□□□□ -1.52
Vps53Q8CCB4 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC5.53□□□□□ -1.52
Vps53Q8CCB4 Gm35212-201ENSMUST00000196672 606 ntBASIC5.53□□□□□ -1.52
Vps53Q8CCB4 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC5.53□□□□□ -1.52
Vps53Q8CCB4 AC124542.1-201ENSMUST00000205588 908 ntBASIC5.53□□□□□ -1.52
Vps53Q8CCB4 Gm45236-201ENSMUST00000208632 229 ntBASIC5.53□□□□□ -1.52
Vps53Q8CCB4 Olfr490-201ENSMUST00000210114 945 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Vps53Q8CCB4 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC5.53□□□□□ -1.52
Vps53Q8CCB4 Gm8556-201ENSMUST00000210437 664 ntBASIC5.53□□□□□ -1.52
Vps53Q8CCB4 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 137.8 ms