Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Col6a6Q8C6K9 4930522H14Rik-202ENSMUST00000102725 854 ntAPPRIS P3 TSL 1 (best) BASIC3.48□□□□□ -1.85
Col6a6Q8C6K9 Gm11408-201ENSMUST00000117889 519 ntBASIC3.48□□□□□ -1.85
Col6a6Q8C6K9 Gm15060-201ENSMUST00000119550 948 ntBASIC3.48□□□□□ -1.85
Col6a6Q8C6K9 Gm15141-201ENSMUST00000121860 729 ntBASIC3.48□□□□□ -1.85
Col6a6Q8C6K9 Gm14246-201ENSMUST00000155173 680 ntTSL 3 BASIC3.48□□□□□ -1.85
Col6a6Q8C6K9 Gm23198-201ENSMUST00000158811 91 ntBASIC3.48□□□□□ -1.85
Col6a6Q8C6K9 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Col6a6Q8C6K9 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC3.48□□□□□ -1.85
Col6a6Q8C6K9 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC3.48□□□□□ -1.85
Col6a6Q8C6K9 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC3.48□□□□□ -1.85
Col6a6Q8C6K9 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC3.48□□□□□ -1.85
Col6a6Q8C6K9 Mir6938-201ENSMUST00000184173 63 ntBASIC3.48□□□□□ -1.85
Col6a6Q8C6K9 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Col6a6Q8C6K9 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC3.48□□□□□ -1.85
Col6a6Q8C6K9 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Col6a6Q8C6K9 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Col6a6Q8C6K9 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC3.48□□□□□ -1.85
Col6a6Q8C6K9 AC123835.1-201ENSMUST00000214362 670 ntBASIC3.48□□□□□ -1.85
Col6a6Q8C6K9 AC130673.2-201ENSMUST00000228091 797 ntBASIC3.48□□□□□ -1.85
Col6a6Q8C6K9 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Col6a6Q8C6K9 Vmn2r115-201ENSMUST00000168175 2574 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Col6a6Q8C6K9 Vmn1r17-203ENSMUST00000228156 2090 ntAPPRIS ALT2 BASIC3.48□□□□□ -1.85
Col6a6Q8C6K9 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Col6a6Q8C6K9 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Col6a6Q8C6K9 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Col6a6Q8C6K9 Gm23609-201ENSMUST00000104542 127 ntBASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 Gm12149-201ENSMUST00000117511 654 ntBASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 Gm13311-201ENSMUST00000117863 379 ntBASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 Ubl5-209ENSMUST00000161882 489 ntTSL 3 BASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 Gm29563-201ENSMUST00000187249 496 ntBASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 Gm8774-201ENSMUST00000203621 692 ntBASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 CT030657.1-201ENSMUST00000222397 378 ntTSL 5 BASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 AC138718.1-201ENSMUST00000225947 1009 ntBASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 Gm44120-201ENSMUST00000203022 3023 ntBASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 Gm2030-201ENSMUST00000119590 1129 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 Gm22398-201ENSMUST00000174941 125 ntBASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 Gm25731-201ENSMUST00000175167 125 ntBASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 Gm28148-201ENSMUST00000186924 697 ntBASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 AC117949.2-201ENSMUST00000225900 584 ntBASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 AC165366.1-201ENSMUST00000225905 505 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 Snord35b-201ENSMUST00000082833 87 ntBASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 Gm8674-201ENSMUST00000179367 3047 ntBASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 Gm3055-202ENSMUST00000218939 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 Zfp781-202ENSMUST00000219144 4067 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 Gm5447-201ENSMUST00000070258 1773 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Col6a6Q8C6K9 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
Col6a6Q8C6K9 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC3.46□□□□□ -1.85
Col6a6Q8C6K9 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
Col6a6Q8C6K9 Gm15926-201ENSMUST00000120492 550 ntBASIC3.46□□□□□ -1.85
Col6a6Q8C6K9 Gm7634-201ENSMUST00000185778 553 ntBASIC3.46□□□□□ -1.85
Col6a6Q8C6K9 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC3.46□□□□□ -1.85
Col6a6Q8C6K9 Gm44543-201ENSMUST00000209136 396 ntBASIC3.46□□□□□ -1.85
Col6a6Q8C6K9 AC122188.1-201ENSMUST00000217534 312 ntBASIC3.46□□□□□ -1.85
Col6a6Q8C6K9 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC3.46□□□□□ -1.85
Col6a6Q8C6K9 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
Col6a6Q8C6K9 Gm5265-201ENSMUST00000076828 342 ntBASIC3.46□□□□□ -1.85
Col6a6Q8C6K9 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
Col6a6Q8C6K9 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC3.46□□□□□ -1.85
Col6a6Q8C6K9 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
Col6a6Q8C6K9 Olfr510-202ENSMUST00000213979 2898 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Col6a6Q8C6K9 Zfp329-201ENSMUST00000072222 6727 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Col6a6Q8C6K9 Gm42492-201ENSMUST00000195780 2915 ntBASIC3.46□□□□□ -1.86
Col6a6Q8C6K9 Gm37262-201ENSMUST00000192816 1818 ntBASIC3.46□□□□□ -1.86
Col6a6Q8C6K9 Inpp4b-201ENSMUST00000042529 4120 ntAPPRIS P3 TSL 1 (best) BASIC3.46□□□□□ -1.86
Col6a6Q8C6K9 Vmn1r18-202ENSMUST00000228574 14315 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Col6a6Q8C6K9 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
Col6a6Q8C6K9 Akr1c14-201ENSMUST00000041768 2436 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
Col6a6Q8C6K9 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Col6a6Q8C6K9 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Col6a6Q8C6K9 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.46□□□□□ -1.86
Col6a6Q8C6K9 Gm22958-201ENSMUST00000122512 184 ntBASIC3.46□□□□□ -1.86
Col6a6Q8C6K9 Gm11281-201ENSMUST00000141391 576 ntBASIC3.46□□□□□ -1.86
Col6a6Q8C6K9 Gm23666-201ENSMUST00000158053 116 ntBASIC3.46□□□□□ -1.86
Col6a6Q8C6K9 Gm19124-201ENSMUST00000191041 832 ntBASIC3.46□□□□□ -1.86
Col6a6Q8C6K9 Gm7142-201ENSMUST00000194232 586 ntBASIC3.46□□□□□ -1.86
Col6a6Q8C6K9 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
Col6a6Q8C6K9 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC3.46□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms