Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Col17a1Q07563 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Col17a1Q07563 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col17a1Q07563 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col17a1Q07563 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Col17a1Q07563 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col17a1Q07563 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Col17a1Q07563 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC7.02□□□□□ -1.29
Col17a1Q07563 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC7.02□□□□□ -1.29
Col17a1Q07563 Trbv28-201ENSMUST00000192804 264 ntBASIC7.02□□□□□ -1.29
Col17a1Q07563 Gm44032-201ENSMUST00000204841 166 ntBASIC7.02□□□□□ -1.29
Col17a1Q07563 Olfr528-ps1-201ENSMUST00000211655 728 ntBASIC7.02□□□□□ -1.29
Col17a1Q07563 C030006N10Rik-201ENSMUST00000219077 517 ntBASIC7.02□□□□□ -1.29
Col17a1Q07563 Gm10801-201ENSMUST00000099684 504 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Col17a1Q07563 Dnm3os-201ENSMUST00000139662 7928 ntBASIC7.02□□□□□ -1.29
Col17a1Q07563 Olfr725-202ENSMUST00000206920 1519 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
Col17a1Q07563 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC7.02□□□□□ -1.29
Col17a1Q07563 Gm44049-201ENSMUST00000204905 2984 ntBASIC7.02□□□□□ -1.29
Col17a1Q07563 1700049E17Rik1-201ENSMUST00000095985 1761 ntAPPRIS P1 TSL 2 BASIC7.02□□□□□ -1.29
Col17a1Q07563 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col17a1Q07563 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Col17a1Q07563 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Col17a1Q07563 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Col17a1Q07563 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Col17a1Q07563 Gm44527-202ENSMUST00000204519 1314 ntBASIC7.01□□□□□ -1.29
Col17a1Q07563 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Col17a1Q07563 Gm15090-201ENSMUST00000118787 1196 ntBASIC7.01□□□□□ -1.29
Col17a1Q07563 Gm11761-201ENSMUST00000121392 445 ntBASIC7.01□□□□□ -1.29
Col17a1Q07563 Gm13502-201ENSMUST00000121574 684 ntBASIC7.01□□□□□ -1.29
Col17a1Q07563 Gm13131-201ENSMUST00000122228 321 ntBASIC7.01□□□□□ -1.29
Col17a1Q07563 Gm15089-201ENSMUST00000122332 1196 ntBASIC7.01□□□□□ -1.29
Col17a1Q07563 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Col17a1Q07563 Gm26276-201ENSMUST00000157099 109 ntBASIC7.01□□□□□ -1.29
Col17a1Q07563 Gt(ROSA)26Sor-204ENSMUST00000167415 551 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Col17a1Q07563 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Col17a1Q07563 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC7.01□□□□□ -1.29
Col17a1Q07563 Vmn1r-ps27-201ENSMUST00000174619 985 ntBASIC7.01□□□□□ -1.29
Col17a1Q07563 Rfpl4b-201ENSMUST00000179279 1054 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Col17a1Q07563 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC7.01□□□□□ -1.29
Col17a1Q07563 2310020H05Rik-201ENSMUST00000189489 720 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Col17a1Q07563 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC7.01□□□□□ -1.29
Col17a1Q07563 Gm43582-201ENSMUST00000196149 343 ntBASIC7.01□□□□□ -1.29
Col17a1Q07563 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC7.01□□□□□ -1.29
Col17a1Q07563 Gm35570-201ENSMUST00000198730 681 ntBASIC7.01□□□□□ -1.29
Col17a1Q07563 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC7.01□□□□□ -1.29
Col17a1Q07563 Gm18611-201ENSMUST00000200334 1118 ntBASIC7.01□□□□□ -1.29
Col17a1Q07563 AC133283.1-201ENSMUST00000228443 859 ntBASIC7.01□□□□□ -1.29
Col17a1Q07563 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC7.01□□□□□ -1.29
Col17a1Q07563 Gm43887-201ENSMUST00000204727 3186 ntBASIC7.01□□□□□ -1.29
Col17a1Q07563 Olfr769-202ENSMUST00000215453 4143 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Col17a1Q07563 Gm43282-201ENSMUST00000201848 2157 ntBASIC7.01□□□□□ -1.29
Col17a1Q07563 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col17a1Q07563 Rabgap1l-202ENSMUST00000028052 6338 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Col17a1Q07563 Gm43682-201ENSMUST00000202150 2090 ntBASIC7.01□□□□□ -1.29
Col17a1Q07563 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
Col17a1Q07563 Prr11-201ENSMUST00000051395 3824 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Col17a1Q07563 Gm35439-201ENSMUST00000200051 4809 ntTSL 1 (best) BASIC7□□□□□ -1.29
Col17a1Q07563 Wrn-201ENSMUST00000033990 5019 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Col17a1Q07563 Gm24340-201ENSMUST00000104208 97 ntBASIC7□□□□□ -1.29
Col17a1Q07563 Defa-ps9-201ENSMUST00000118264 276 ntBASIC7□□□□□ -1.29
Col17a1Q07563 Gm15268-201ENSMUST00000118845 352 ntBASIC7□□□□□ -1.29
Col17a1Q07563 Gm15885-201ENSMUST00000122114 388 ntBASIC7□□□□□ -1.29
Col17a1Q07563 Spink14-202ENSMUST00000162265 542 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Col17a1Q07563 Gm21827-201ENSMUST00000178247 423 ntBASIC7□□□□□ -1.29
Col17a1Q07563 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC7□□□□□ -1.29
Col17a1Q07563 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC7□□□□□ -1.29
Col17a1Q07563 Gm28186-201ENSMUST00000187447 679 ntBASIC7□□□□□ -1.29
Col17a1Q07563 Gm19987-201ENSMUST00000216339 499 ntBASIC7□□□□□ -1.29
Col17a1Q07563 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC7□□□□□ -1.29
Col17a1Q07563 AC140210.1-201ENSMUST00000224961 534 ntBASIC7□□□□□ -1.29
Col17a1Q07563 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC7□□□□□ -1.29
Col17a1Q07563 Gm25475-201ENSMUST00000082825 180 ntBASIC7□□□□□ -1.29
Col17a1Q07563 n-R5s160-201ENSMUST00000083096 120 ntBASIC7□□□□□ -1.29
Col17a1Q07563 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC7□□□□□ -1.29
Col17a1Q07563 Gm43665-201ENSMUST00000198672 1659 ntBASIC7□□□□□ -1.29
Col17a1Q07563 Gm8473-201ENSMUST00000176697 1885 ntBASIC7□□□□□ -1.29
Col17a1Q07563 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
Col17a1Q07563 Nlrp4c-204ENSMUST00000208360 3058 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Col17a1Q07563 Agtr2-201ENSMUST00000089188 3283 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Col17a1Q07563 Vmn2r-ps82-201ENSMUST00000174222 1641 ntBASIC7□□□□□ -1.29
Col17a1Q07563 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC7□□□□□ -1.29
Col17a1Q07563 Kctd4-201ENSMUST00000050120 3998 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Col17a1Q07563 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC7□□□□□ -1.29
Col17a1Q07563 Igsf10-203ENSMUST00000194546 8393 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Col17a1Q07563 AC121997.2-201ENSMUST00000228095 2294 ntBASIC7□□□□□ -1.29
Col17a1Q07563 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC7□□□□□ -1.29
Col17a1Q07563 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Col17a1Q07563 Gm14326-204ENSMUST00000178829 1665 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Col17a1Q07563 Olfr1314-202ENSMUST00000207976 2976 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
Col17a1Q07563 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
Col17a1Q07563 Gm25773-201ENSMUST00000116718 127 ntBASIC6.99□□□□□ -1.29
Col17a1Q07563 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC6.99□□□□□ -1.29
Col17a1Q07563 Gm26148-201ENSMUST00000157430 68 ntBASIC6.99□□□□□ -1.29
Col17a1Q07563 Gm3470-201ENSMUST00000160819 420 ntBASIC6.99□□□□□ -1.29
Col17a1Q07563 Gm19637-201ENSMUST00000185933 579 ntBASIC6.99□□□□□ -1.29
Col17a1Q07563 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
Col17a1Q07563 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC6.99□□□□□ -1.29
Col17a1Q07563 Gm43431-201ENSMUST00000198577 340 ntBASIC6.99□□□□□ -1.29
Col17a1Q07563 Gm42458-201ENSMUST00000201914 369 ntBASIC6.99□□□□□ -1.29
Col17a1Q07563 Gm5876-201ENSMUST00000203735 243 ntBASIC6.99□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms