Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 n-R5s207-201ENSMUST00000122497 118 ntBASIC5.5□□□□□ -1.53
Sox9Q04887 n-R5s174-201ENSMUST00000122638 121 ntBASIC5.5□□□□□ -1.53
Sox9Q04887 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Sox9Q04887 Gm23906-201ENSMUST00000157573 128 ntBASIC5.5□□□□□ -1.53
Sox9Q04887 Gm23501-201ENSMUST00000157744 256 ntBASIC5.5□□□□□ -1.53
Sox9Q04887 Gm17121-201ENSMUST00000170414 847 ntBASIC5.5□□□□□ -1.53
Sox9Q04887 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Sox9Q04887 Gm15143-201ENSMUST00000178180 714 ntBASIC5.5□□□□□ -1.53
Sox9Q04887 Gm5558-201ENSMUST00000178933 495 ntBASIC5.5□□□□□ -1.53
Sox9Q04887 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Sox9Q04887 Gm21758-201ENSMUST00000179336 819 ntBASIC5.5□□□□□ -1.53
Sox9Q04887 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Sox9Q04887 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Sox9Q04887 Gm17222-201ENSMUST00000180135 847 ntBASIC5.5□□□□□ -1.53
Sox9Q04887 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sox9Q04887 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Sox9Q04887 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC5.5□□□□□ -1.53
Sox9Q04887 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC5.5□□□□□ -1.53
Sox9Q04887 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC5.5□□□□□ -1.53
Sox9Q04887 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC5.5□□□□□ -1.53
Sox9Q04887 Gm29647-201ENSMUST00000188795 666 ntBASIC5.5□□□□□ -1.53
Sox9Q04887 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC5.5□□□□□ -1.53
Sox9Q04887 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC5.5□□□□□ -1.53
Sox9Q04887 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC5.5□□□□□ -1.53
Sox9Q04887 Gm28337-201ENSMUST00000190425 666 ntBASIC5.5□□□□□ -1.53
Sox9Q04887 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC5.5□□□□□ -1.53
Sox9Q04887 Gm28504-201ENSMUST00000190977 666 ntBASIC5.5□□□□□ -1.53
Sox9Q04887 Gm31511-201ENSMUST00000193134 657 ntBASIC5.5□□□□□ -1.53
Sox9Q04887 Gm35843-201ENSMUST00000193716 666 ntBASIC5.5□□□□□ -1.53
Sox9Q04887 Igkv12-49-201ENSMUST00000197714 278 ntBASIC5.5□□□□□ -1.53
Sox9Q04887 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Sox9Q04887 Gm4321-201ENSMUST00000200520 442 ntBASIC5.5□□□□□ -1.53
Sox9Q04887 Gm43227-201ENSMUST00000202239 677 ntBASIC5.5□□□□□ -1.53
Sox9Q04887 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC5.5□□□□□ -1.53
Sox9Q04887 Gm45422-201ENSMUST00000211476 246 ntBASIC5.5□□□□□ -1.53
Sox9Q04887 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC5.5□□□□□ -1.53
Sox9Q04887 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC5.5□□□□□ -1.53
Sox9Q04887 AC154788.1-201ENSMUST00000225003 340 ntBASIC5.5□□□□□ -1.53
Sox9Q04887 AC074315.1-201ENSMUST00000228801 214 ntBASIC5.5□□□□□ -1.53
Sox9Q04887 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC5.5□□□□□ -1.53
Sox9Q04887 Tbl1xr1-201ENSMUST00000063988 6667 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sox9Q04887 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
Sox9Q04887 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC5.5□□□□□ -1.53
Sox9Q04887 Fastkd1-201ENSMUST00000073152 2865 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sox9Q04887 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sox9Q04887 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sox9Q04887 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Sox9Q04887 A530064N14Rik-201ENSMUST00000195338 1492 ntBASIC5.5□□□□□ -1.53
Sox9Q04887 Gm43887-201ENSMUST00000204727 3186 ntBASIC5.5□□□□□ -1.53
Sox9Q04887 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Sox9Q04887 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Sox9Q04887 Olfr738-203ENSMUST00000214853 2046 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Sox9Q04887 Gm5746-201ENSMUST00000183550 2200 ntBASIC5.5□□□□□ -1.53
Sox9Q04887 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Sox9Q04887 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Sox9Q04887 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sox9Q04887 Gm7646-201ENSMUST00000198590 1346 ntBASIC5.49□□□□□ -1.53
Sox9Q04887 Gm44527-202ENSMUST00000204519 1314 ntBASIC5.49□□□□□ -1.53
Sox9Q04887 Olfr733-202ENSMUST00000214372 3530 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Sox9Q04887 Ctps2-204ENSMUST00000112301 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sox9Q04887 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Sox9Q04887 AC121870.1-201ENSMUST00000216279 4879 ntBASIC5.49□□□□□ -1.53
Sox9Q04887 Pramel4-201ENSMUST00000084191 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Sox9Q04887 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Sox9Q04887 Iqca-207ENSMUST00000212394 2574 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Sox9Q04887 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Sox9Q04887 Gm24715-201ENSMUST00000102377 95 ntBASIC5.49□□□□□ -1.53
Sox9Q04887 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC5.49□□□□□ -1.53
Sox9Q04887 Vmn1r-ps97-201ENSMUST00000118338 603 ntBASIC5.49□□□□□ -1.53
Sox9Q04887 Gm14534-201ENSMUST00000120045 357 ntBASIC5.49□□□□□ -1.53
Sox9Q04887 Gm13743-201ENSMUST00000121486 724 ntBASIC5.49□□□□□ -1.53
Sox9Q04887 Gm15591-201ENSMUST00000138539 627 ntTSL 5 BASIC5.49□□□□□ -1.53
Sox9Q04887 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Sox9Q04887 Gm25150-201ENSMUST00000157121 60 ntBASIC5.49□□□□□ -1.53
Sox9Q04887 Gm23981-201ENSMUST00000157136 106 ntBASIC5.49□□□□□ -1.53
Sox9Q04887 Gm25553-201ENSMUST00000158076 79 ntBASIC5.49□□□□□ -1.53
Sox9Q04887 Mir5106-201ENSMUST00000174936 73 ntBASIC5.49□□□□□ -1.53
Sox9Q04887 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC5.49□□□□□ -1.53
Sox9Q04887 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Sox9Q04887 Mir6960-201ENSMUST00000183449 61 ntBASIC5.49□□□□□ -1.53
Sox9Q04887 Gm7870-201ENSMUST00000184467 616 ntBASIC5.49□□□□□ -1.53
Sox9Q04887 Gm27690-201ENSMUST00000184596 126 ntBASIC5.49□□□□□ -1.53
Sox9Q04887 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Sox9Q04887 Gm20832-201ENSMUST00000189076 665 ntBASIC5.49□□□□□ -1.53
Sox9Q04887 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC5.49□□□□□ -1.53
Sox9Q04887 Gm37445-201ENSMUST00000195318 242 ntBASIC5.49□□□□□ -1.53
Sox9Q04887 Gm30638-201ENSMUST00000195570 656 ntBASIC5.49□□□□□ -1.53
Sox9Q04887 Gm36728-201ENSMUST00000195782 665 ntBASIC5.49□□□□□ -1.53
Sox9Q04887 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC5.49□□□□□ -1.53
Sox9Q04887 Gm42818-201ENSMUST00000198869 987 ntBASIC5.49□□□□□ -1.53
Sox9Q04887 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC5.49□□□□□ -1.53
Sox9Q04887 Gm43224-201ENSMUST00000201567 898 ntBASIC5.49□□□□□ -1.53
Sox9Q04887 Gm32308-201ENSMUST00000203053 280 ntBASIC5.49□□□□□ -1.53
Sox9Q04887 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC5.49□□□□□ -1.53
Sox9Q04887 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC5.49□□□□□ -1.53
Sox9Q04887 AC102291.1-201ENSMUST00000227164 529 ntBASIC5.49□□□□□ -1.53
Sox9Q04887 AC137961.1-201ENSMUST00000227924 734 ntBASIC5.49□□□□□ -1.53
Sox9Q04887 Gm12582-201ENSMUST00000030555 697 ntBASIC5.49□□□□□ -1.53
Sox9Q04887 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Sox9Q04887 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 118 ms