Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gm14125-202ENSMUST00000120921 756 ntBASIC3.79□□□□□ -1.8
Nkx2-1P50220 Defa-ps6-201ENSMUST00000122172 282 ntBASIC3.79□□□□□ -1.8
Nkx2-1P50220 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Nkx2-1P50220 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC3.79□□□□□ -1.8
Nkx2-1P50220 Platr32-201ENSMUST00000148597 394 ntTSL 5 BASIC3.79□□□□□ -1.8
Nkx2-1P50220 4930503B20Rik-203ENSMUST00000149825 970 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
Nkx2-1P50220 Gm16545-201ENSMUST00000161968 463 ntBASIC3.79□□□□□ -1.8
Nkx2-1P50220 Gm16490-201ENSMUST00000165299 351 ntBASIC3.79□□□□□ -1.8
Nkx2-1P50220 Gm17164-201ENSMUST00000169013 506 ntBASIC3.79□□□□□ -1.8
Nkx2-1P50220 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Nkx2-1P50220 Gm6337-202ENSMUST00000170613 997 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
Nkx2-1P50220 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Nkx2-1P50220 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC3.79□□□□□ -1.8
Nkx2-1P50220 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC3.79□□□□□ -1.8
Nkx2-1P50220 Rab26os-201ENSMUST00000176215 477 ntBASIC3.79□□□□□ -1.8
Nkx2-1P50220 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Nkx2-1P50220 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Nkx2-1P50220 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Nkx2-1P50220 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Nkx2-1P50220 Mir6911-201ENSMUST00000184241 69 ntBASIC3.79□□□□□ -1.8
Nkx2-1P50220 Gm27492-201ENSMUST00000185194 187 ntBASIC3.79□□□□□ -1.8
Nkx2-1P50220 Gm38080-201ENSMUST00000194035 268 ntBASIC3.79□□□□□ -1.8
Nkx2-1P50220 Gm20056-201ENSMUST00000194813 519 ntBASIC3.79□□□□□ -1.8
Nkx2-1P50220 Gm43344-201ENSMUST00000198723 1229 ntBASIC3.79□□□□□ -1.8
Nkx2-1P50220 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Nkx2-1P50220 Gm44061-201ENSMUST00000203962 1195 ntBASIC3.79□□□□□ -1.8
Nkx2-1P50220 Gm44954-201ENSMUST00000208513 227 ntBASIC3.79□□□□□ -1.8
Nkx2-1P50220 Gm19232-201ENSMUST00000211621 652 ntBASIC3.79□□□□□ -1.8
Nkx2-1P50220 Gm45731-201ENSMUST00000211988 1203 ntBASIC3.79□□□□□ -1.8
Nkx2-1P50220 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Nkx2-1P50220 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC3.79□□□□□ -1.8
Nkx2-1P50220 AC159297.2-201ENSMUST00000219567 1075 ntBASIC3.79□□□□□ -1.8
Nkx2-1P50220 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC3.79□□□□□ -1.8
Nkx2-1P50220 Gm9512-201ENSMUST00000223112 497 ntBASIC3.79□□□□□ -1.8
Nkx2-1P50220 AC102352.1-201ENSMUST00000224187 582 ntBASIC3.79□□□□□ -1.8
Nkx2-1P50220 1700111E14Rik-201ENSMUST00000031863 908 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Nkx2-1P50220 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Nkx2-1P50220 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Nkx2-1P50220 Gm25140-201ENSMUST00000083254 140 ntBASIC3.79□□□□□ -1.8
Nkx2-1P50220 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
Nkx2-1P50220 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
Nkx2-1P50220 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Nkx2-1P50220 Olfr955-203ENSMUST00000220176 1452 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Nkx2-1P50220 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
Nkx2-1P50220 AC132336.1-201ENSMUST00000222844 1740 ntBASIC3.78□□□□□ -1.8
Nkx2-1P50220 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Nkx2-1P50220 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Nkx2-1P50220 Olfr726-208ENSMUST00000217422 1302 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Nkx2-1P50220 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Nkx2-1P50220 Gm36931-201ENSMUST00000192997 4801 ntBASIC3.78□□□□□ -1.8
Nkx2-1P50220 Brcc3-202ENSMUST00000114074 2473 ntAPPRIS P2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Nkx2-1P50220 Vmn1r46-202ENSMUST00000205088 10770 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
Nkx2-1P50220 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC3.78□□□□□ -1.8
Nkx2-1P50220 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Nkx2-1P50220 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Nkx2-1P50220 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC3.78□□□□□ -1.8
Nkx2-1P50220 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
Nkx2-1P50220 Gm14107-201ENSMUST00000117774 330 ntBASIC3.78□□□□□ -1.8
Nkx2-1P50220 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC3.78□□□□□ -1.8
Nkx2-1P50220 Gm12067-201ENSMUST00000119755 1148 ntBASIC3.78□□□□□ -1.8
Nkx2-1P50220 Gm16179-201ENSMUST00000120685 373 ntBASIC3.78□□□□□ -1.8
Nkx2-1P50220 Gm5391-201ENSMUST00000121155 613 ntBASIC3.78□□□□□ -1.8
Nkx2-1P50220 Gm13676-201ENSMUST00000122185 591 ntBASIC3.78□□□□□ -1.8
Nkx2-1P50220 Gm15212-201ENSMUST00000122403 466 ntBASIC3.78□□□□□ -1.8
Nkx2-1P50220 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC3.78□□□□□ -1.8
Nkx2-1P50220 Gm25653-201ENSMUST00000158473 138 ntBASIC3.78□□□□□ -1.8
Nkx2-1P50220 Gm23387-201ENSMUST00000158586 107 ntBASIC3.78□□□□□ -1.8
Nkx2-1P50220 Gm2389-201ENSMUST00000160487 189 ntBASIC3.78□□□□□ -1.8
Nkx2-1P50220 Gm5263-201ENSMUST00000163646 601 ntBASIC3.78□□□□□ -1.8
Nkx2-1P50220 Gm8358-201ENSMUST00000167222 555 ntBASIC3.78□□□□□ -1.8
Nkx2-1P50220 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Nkx2-1P50220 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Nkx2-1P50220 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Nkx2-1P50220 Mir3110-201ENSMUST00000175053 80 ntBASIC3.78□□□□□ -1.8
Nkx2-1P50220 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC3.78□□□□□ -1.8
Nkx2-1P50220 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Nkx2-1P50220 Gm22252-201ENSMUST00000179316 79 ntBASIC3.78□□□□□ -1.8
Nkx2-1P50220 Gm28118-201ENSMUST00000185957 294 ntBASIC3.78□□□□□ -1.8
Nkx2-1P50220 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC3.78□□□□□ -1.8
Nkx2-1P50220 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Nkx2-1P50220 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC3.78□□□□□ -1.8
Nkx2-1P50220 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Nkx2-1P50220 Gm38214-201ENSMUST00000192581 988 ntBASIC3.78□□□□□ -1.8
Nkx2-1P50220 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC3.78□□□□□ -1.8
Nkx2-1P50220 Gm37202-201ENSMUST00000193679 361 ntTSL 3 BASIC3.78□□□□□ -1.8
Nkx2-1P50220 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC3.78□□□□□ -1.8
Nkx2-1P50220 Gm37993-201ENSMUST00000195301 988 ntBASIC3.78□□□□□ -1.8
Nkx2-1P50220 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC3.78□□□□□ -1.8
Nkx2-1P50220 Gm29793-201ENSMUST00000202874 460 ntBASIC3.78□□□□□ -1.8
Nkx2-1P50220 Gm44389-201ENSMUST00000203795 182 ntBASIC3.78□□□□□ -1.8
Nkx2-1P50220 Gm44681-201ENSMUST00000208447 842 ntBASIC3.78□□□□□ -1.8
Nkx2-1P50220 Gm9375-201ENSMUST00000208899 903 ntBASIC3.78□□□□□ -1.8
Nkx2-1P50220 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Nkx2-1P50220 Gm45488-201ENSMUST00000210747 371 ntTSL 3 BASIC3.78□□□□□ -1.8
Nkx2-1P50220 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC3.78□□□□□ -1.8
Nkx2-1P50220 Gm46138-201ENSMUST00000215294 426 ntBASIC3.78□□□□□ -1.8
Nkx2-1P50220 Gm19256-201ENSMUST00000218550 231 ntBASIC3.78□□□□□ -1.8
Nkx2-1P50220 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC3.78□□□□□ -1.8
Nkx2-1P50220 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC3.78□□□□□ -1.8
Nkx2-1P50220 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC3.78□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms