Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm37211-201ENSMUST00000193392 3433 ntBASIC6.32□□□□□ -1.4
Col18a1P39061 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col18a1P39061 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col18a1P39061 AC124579.1-201ENSMUST00000223468 2520 ntBASIC6.32□□□□□ -1.4
Col18a1P39061 Gm23542-201ENSMUST00000158208 96 ntBASIC6.32□□□□□ -1.4
Col18a1P39061 Gm25999-201ENSMUST00000175398 133 ntBASIC6.32□□□□□ -1.4
Col18a1P39061 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC6.32□□□□□ -1.4
Col18a1P39061 Gm25397-201ENSMUST00000176951 92 ntBASIC6.32□□□□□ -1.4
Col18a1P39061 Ang-ps2-201ENSMUST00000178173 433 ntBASIC6.32□□□□□ -1.4
Col18a1P39061 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col18a1P39061 Mir7j-201ENSMUST00000184427 122 ntBASIC6.32□□□□□ -1.4
Col18a1P39061 Gm29634-201ENSMUST00000188467 696 ntBASIC6.32□□□□□ -1.4
Col18a1P39061 Gm28699-201ENSMUST00000189193 696 ntBASIC6.32□□□□□ -1.4
Col18a1P39061 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC6.32□□□□□ -1.4
Col18a1P39061 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC6.32□□□□□ -1.4
Col18a1P39061 Gm36983-201ENSMUST00000192280 1102 ntBASIC6.32□□□□□ -1.4
Col18a1P39061 Gm42468-201ENSMUST00000200360 703 ntTSL 3 BASIC6.32□□□□□ -1.4
Col18a1P39061 Gm44694-201ENSMUST00000205317 1298 ntBASIC6.32□□□□□ -1.4
Col18a1P39061 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC6.32□□□□□ -1.4
Col18a1P39061 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC6.32□□□□□ -1.4
Col18a1P39061 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC6.32□□□□□ -1.4
Col18a1P39061 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Col18a1P39061 Tmed10-203ENSMUST00000222585 619 ntTSL 3 BASIC6.32□□□□□ -1.4
Col18a1P39061 AC154241.1-201ENSMUST00000223952 356 ntBASIC6.32□□□□□ -1.4
Col18a1P39061 AC187103.4-202ENSMUST00000225091 230 ntBASIC6.32□□□□□ -1.4
Col18a1P39061 AC154532.2-201ENSMUST00000228947 598 ntBASIC6.32□□□□□ -1.4
Col18a1P39061 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col18a1P39061 Olfr860-201ENSMUST00000086482 1686 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
Col18a1P39061 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Col18a1P39061 Gm44624-201ENSMUST00000208700 2278 ntBASIC6.32□□□□□ -1.4
Col18a1P39061 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col18a1P39061 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Col18a1P39061 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col18a1P39061 Olfr731-204ENSMUST00000214388 5438 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
Col18a1P39061 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col18a1P39061 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
Col18a1P39061 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
Col18a1P39061 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC6.32□□□□□ -1.4
Col18a1P39061 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Col18a1P39061 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Col18a1P39061 Gm14788-201ENSMUST00000119457 375 ntBASIC6.31□□□□□ -1.4
Col18a1P39061 Gm16053-201ENSMUST00000120511 188 ntBASIC6.31□□□□□ -1.4
Col18a1P39061 Gm14916-201ENSMUST00000121904 204 ntBASIC6.31□□□□□ -1.4
Col18a1P39061 Gm22842-201ENSMUST00000157709 118 ntBASIC6.31□□□□□ -1.4
Col18a1P39061 Gm22336-201ENSMUST00000157719 107 ntBASIC6.31□□□□□ -1.4
Col18a1P39061 Gm25386-201ENSMUST00000157814 288 ntBASIC6.31□□□□□ -1.4
Col18a1P39061 Gm22186-201ENSMUST00000157822 122 ntBASIC6.31□□□□□ -1.4
Col18a1P39061 Gm17919-201ENSMUST00000173344 312 ntBASIC6.31□□□□□ -1.4
Col18a1P39061 Gm27695-201ENSMUST00000184301 91 ntBASIC6.31□□□□□ -1.4
Col18a1P39061 Mir6481-201ENSMUST00000184617 110 ntBASIC6.31□□□□□ -1.4
Col18a1P39061 Gm28628-201ENSMUST00000187006 264 ntBASIC6.31□□□□□ -1.4
Col18a1P39061 Gm8282-201ENSMUST00000187559 483 ntBASIC6.31□□□□□ -1.4
Col18a1P39061 Gm37416-201ENSMUST00000193596 318 ntBASIC6.31□□□□□ -1.4
Col18a1P39061 Gm9317-201ENSMUST00000197055 862 ntBASIC6.31□□□□□ -1.4
Col18a1P39061 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Col18a1P39061 CT030242.2-201ENSMUST00000221588 148 ntBASIC6.31□□□□□ -1.4
Col18a1P39061 AC134577.1-201ENSMUST00000227572 295 ntBASIC6.31□□□□□ -1.4
Col18a1P39061 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col18a1P39061 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC6.31□□□□□ -1.4
Col18a1P39061 Olfr1436-201ENSMUST00000087812 948 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Col18a1P39061 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Col18a1P39061 Gm21985-201ENSMUST00000141047 4532 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Col18a1P39061 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col18a1P39061 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col18a1P39061 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col18a1P39061 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Col18a1P39061 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col18a1P39061 Olfr1383-202ENSMUST00000204706 4168 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Col18a1P39061 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col18a1P39061 Zgrf1-203ENSMUST00000196141 6932 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Col18a1P39061 Gm37010-201ENSMUST00000194539 1704 ntBASIC6.31□□□□□ -1.4
Col18a1P39061 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Col18a1P39061 Ighv5-16-201ENSMUST00000103458 350 ntAPPRIS ALT2 BASIC6.31□□□□□ -1.4
Col18a1P39061 Mir297a-2-201ENSMUST00000103795 90 ntBASIC6.31□□□□□ -1.4
Col18a1P39061 Gm15076-201ENSMUST00000117076 474 ntBASIC6.31□□□□□ -1.4
Col18a1P39061 Gm15001-201ENSMUST00000117657 795 ntBASIC6.31□□□□□ -1.4
Col18a1P39061 Gm12897-201ENSMUST00000120341 250 ntBASIC6.31□□□□□ -1.4
Col18a1P39061 Gm13602-201ENSMUST00000122405 493 ntBASIC6.31□□□□□ -1.4
Col18a1P39061 Gm17155-201ENSMUST00000165969 473 ntBASIC6.31□□□□□ -1.4
Col18a1P39061 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col18a1P39061 Gm38270-201ENSMUST00000192721 407 ntBASIC6.31□□□□□ -1.4
Col18a1P39061 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC6.31□□□□□ -1.4
Col18a1P39061 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC6.31□□□□□ -1.4
Col18a1P39061 Gm43559-201ENSMUST00000198755 466 ntBASIC6.31□□□□□ -1.4
Col18a1P39061 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col18a1P39061 Gm43406-201ENSMUST00000200356 334 ntBASIC6.31□□□□□ -1.4
Col18a1P39061 Gm45400-201ENSMUST00000211603 653 ntBASIC6.31□□□□□ -1.4
Col18a1P39061 Gm29809-201ENSMUST00000218423 493 ntBASIC6.31□□□□□ -1.4
Col18a1P39061 Gm8137-201ENSMUST00000218997 463 ntBASIC6.31□□□□□ -1.4
Col18a1P39061 Gm46190-201ENSMUST00000219650 427 ntBASIC6.31□□□□□ -1.4
Col18a1P39061 4930520K02Rik-202ENSMUST00000219658 396 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Col18a1P39061 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col18a1P39061 AL590503.1-201ENSMUST00000222053 321 ntBASIC6.31□□□□□ -1.4
Col18a1P39061 Gm39473-201ENSMUST00000223498 522 ntTSL 3 BASIC6.31□□□□□ -1.4
Col18a1P39061 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Col18a1P39061 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col18a1P39061 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC6.31□□□□□ -1.4
Col18a1P39061 Olfr570-201ENSMUST00000098215 1045 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Col18a1P39061 Trpm6-201ENSMUST00000040489 6508 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Col18a1P39061 Olfr1338-203ENSMUST00000216559 2829 ntAPPRIS ALT1 TSL 5 BASIC6.31□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 119.5 ms