Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Col2a1P28481 A630033H20Rik-206ENSMUST00000180182 2997 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
Col2a1P28481 9430065F17Rik-202ENSMUST00000180908 1084 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Col2a1P28481 Mir7676-1-201ENSMUST00000183491 62 ntBASIC4.46□□□□□ -1.7
Col2a1P28481 Mir7676-2-201ENSMUST00000183523 62 ntBASIC4.46□□□□□ -1.7
Col2a1P28481 Mir6385-201ENSMUST00000184295 105 ntBASIC4.46□□□□□ -1.7
Col2a1P28481 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.46□□□□□ -1.7
Col2a1P28481 Gm37239-201ENSMUST00000193510 141 ntBASIC4.46□□□□□ -1.7
Col2a1P28481 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC4.46□□□□□ -1.7
Col2a1P28481 Gm7786-201ENSMUST00000210494 436 ntBASIC4.46□□□□□ -1.7
Col2a1P28481 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC4.46□□□□□ -1.7
Col2a1P28481 AC129323.1-201ENSMUST00000216733 470 ntBASIC4.46□□□□□ -1.7
Col2a1P28481 Olfr1180-203ENSMUST00000217320 2107 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Col2a1P28481 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Col2a1P28481 AC138718.1-201ENSMUST00000225947 1009 ntBASIC4.46□□□□□ -1.7
Col2a1P28481 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.46□□□□□ -1.7
Col2a1P28481 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Col2a1P28481 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
Col2a1P28481 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Col2a1P28481 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Col2a1P28481 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC4.46□□□□□ -1.7
Col2a1P28481 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Col2a1P28481 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col2a1P28481 Olfr1274-ps-202ENSMUST00000216111 3395 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col2a1P28481 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col2a1P28481 Olfr995-202ENSMUST00000216933 1706 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col2a1P28481 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col2a1P28481 Drr1-202ENSMUST00000151575 2789 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Col2a1P28481 Igkv4-69-201ENSMUST00000103349 348 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Col2a1P28481 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Col2a1P28481 Gm10241-201ENSMUST00000117664 286 ntBASIC4.45□□□□□ -1.7
Col2a1P28481 Gm13690-201ENSMUST00000118989 285 ntBASIC4.45□□□□□ -1.7
Col2a1P28481 Gm9043-201ENSMUST00000119677 314 ntBASIC4.45□□□□□ -1.7
Col2a1P28481 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC4.45□□□□□ -1.7
Col2a1P28481 Gm22514-201ENSMUST00000122547 308 ntBASIC4.45□□□□□ -1.7
Col2a1P28481 9130015L21Rik-201ENSMUST00000140319 606 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Col2a1P28481 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC4.45□□□□□ -1.7
Col2a1P28481 Gm23084-201ENSMUST00000157850 114 ntBASIC4.45□□□□□ -1.7
Col2a1P28481 Gm20538-201ENSMUST00000166808 225 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
Col2a1P28481 Gm25025-201ENSMUST00000175018 111 ntBASIC4.45□□□□□ -1.7
Col2a1P28481 Gm27036-201ENSMUST00000182465 980 ntBASIC4.45□□□□□ -1.7
Col2a1P28481 Gm28390-201ENSMUST00000185212 700 ntBASIC4.45□□□□□ -1.7
Col2a1P28481 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC4.45□□□□□ -1.7
Col2a1P28481 Gm8939-201ENSMUST00000192577 964 ntBASIC4.45□□□□□ -1.7
Col2a1P28481 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC4.45□□□□□ -1.7
Col2a1P28481 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC4.45□□□□□ -1.7
Col2a1P28481 Gm44475-201ENSMUST00000204041 424 ntBASIC4.45□□□□□ -1.7
Col2a1P28481 Gm45574-201ENSMUST00000210921 331 ntBASIC4.45□□□□□ -1.7
Col2a1P28481 Gm7380-201ENSMUST00000211599 466 ntBASIC4.45□□□□□ -1.7
Col2a1P28481 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC4.45□□□□□ -1.7
Col2a1P28481 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Col2a1P28481 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col2a1P28481 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Col2a1P28481 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Col2a1P28481 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Col2a1P28481 Gm14621-201ENSMUST00000117709 689 ntBASIC4.44□□□□□ -1.7
Col2a1P28481 Gm11971-201ENSMUST00000117715 288 ntBASIC4.44□□□□□ -1.7
Col2a1P28481 Gm15988-201ENSMUST00000118677 367 ntBASIC4.44□□□□□ -1.7
Col2a1P28481 Gm11600-201ENSMUST00000119592 240 ntBASIC4.44□□□□□ -1.7
Col2a1P28481 Gm8757-201ENSMUST00000119660 372 ntBASIC4.44□□□□□ -1.7
Col2a1P28481 Gm15212-201ENSMUST00000122403 466 ntBASIC4.44□□□□□ -1.7
Col2a1P28481 Gm24550-201ENSMUST00000158648 279 ntBASIC4.44□□□□□ -1.7
Col2a1P28481 Spin2g-201ENSMUST00000178425 687 ntBASIC4.44□□□□□ -1.7
Col2a1P28481 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Col2a1P28481 Gm27392-201ENSMUST00000185041 101 ntBASIC4.44□□□□□ -1.7
Col2a1P28481 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC4.44□□□□□ -1.7
Col2a1P28481 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC4.44□□□□□ -1.7
Col2a1P28481 Gm38234-201ENSMUST00000195204 421 ntBASIC4.44□□□□□ -1.7
Col2a1P28481 Gm43039-201ENSMUST00000202883 963 ntBASIC4.44□□□□□ -1.7
Col2a1P28481 Gm45157-201ENSMUST00000208729 401 ntBASIC4.44□□□□□ -1.7
Col2a1P28481 Gm35865-201ENSMUST00000220180 287 ntTSL 3 BASIC4.44□□□□□ -1.7
Col2a1P28481 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Col2a1P28481 AC154618.1-201ENSMUST00000227451 303 ntBASIC4.44□□□□□ -1.7
Col2a1P28481 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Col2a1P28481 Gm44120-201ENSMUST00000203022 3023 ntBASIC4.44□□□□□ -1.7
Col2a1P28481 Abcg2-201ENSMUST00000031822 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Col2a1P28481 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC4.44□□□□□ -1.7
Col2a1P28481 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Col2a1P28481 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Col2a1P28481 Gm22480-201ENSMUST00000122568 128 ntBASIC4.43□□□□□ -1.7
Col2a1P28481 Gm26276-201ENSMUST00000157099 109 ntBASIC4.43□□□□□ -1.7
Col2a1P28481 Gm24976-201ENSMUST00000158972 135 ntBASIC4.43□□□□□ -1.7
Col2a1P28481 Gm16026-202ENSMUST00000159695 772 ntBASIC4.43□□□□□ -1.7
Col2a1P28481 Gm28314-201ENSMUST00000191276 345 ntBASIC4.43□□□□□ -1.7
Col2a1P28481 Gm43717-201ENSMUST00000198684 310 ntBASIC4.43□□□□□ -1.7
Col2a1P28481 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Col2a1P28481 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC4.43□□□□□ -1.7
Col2a1P28481 AC123835.1-201ENSMUST00000214362 670 ntBASIC4.43□□□□□ -1.7
Col2a1P28481 AC159246.1-201ENSMUST00000214478 249 ntBASIC4.43□□□□□ -1.7
Col2a1P28481 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC4.43□□□□□ -1.7
Col2a1P28481 AC158142.1-201ENSMUST00000226721 416 ntBASIC4.43□□□□□ -1.7
Col2a1P28481 AC121898.1-201ENSMUST00000227599 288 ntBASIC4.43□□□□□ -1.7
Col2a1P28481 Olfr1366-202ENSMUST00000175637 3045 ntAPPRIS ALT2 TSL 3 BASIC4.43□□□□□ -1.7
Col2a1P28481 Olfr263-202ENSMUST00000215804 3963 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Col2a1P28481 Gm38073-201ENSMUST00000195141 3665 ntBASIC4.43□□□□□ -1.7
Col2a1P28481 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col2a1P28481 Cyp3a25-201ENSMUST00000068317 2000 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col2a1P28481 Stk38l-201ENSMUST00000001675 4550 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Col2a1P28481 Olfr1130-201ENSMUST00000213103 2643 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
Col2a1P28481 Olfr1130-202ENSMUST00000216580 2648 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms