Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 AC126685.1-201ENSMUST00000221001 121 ntBASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 AV026068-216ENSMUST00000223874 328 ntBASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 CT030238.4-203ENSMUST00000227343 836 ntBASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Gm23927-201ENSMUST00000082466 215 ntBASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Gm23506-201ENSMUST00000083077 107 ntBASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 n-R5s69-201ENSMUST00000083872 119 ntBASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Gm23502-201ENSMUST00000083902 145 ntBASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Gm23795-201ENSMUST00000084006 137 ntBASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Gm43857-201ENSMUST00000200343 3079 ntBASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Rtl9-201ENSMUST00000165829 4104 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Gng12-201ENSMUST00000043148 4248 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Vmn2r2-202ENSMUST00000177151 2727 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
Pcdh1F7BJK1 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Lrriq1-201ENSMUST00000020043 2542 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Mocs2-213ENSMUST00000184245 4559 ntTSL 5 BASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Tmc1-201ENSMUST00000039500 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Gm25097-201ENSMUST00000104042 145 ntBASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Gm6427-201ENSMUST00000118721 979 ntBASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Gm13356-201ENSMUST00000121678 335 ntBASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Gm12618-201ENSMUST00000121754 483 ntBASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Gm23233-201ENSMUST00000157301 137 ntBASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Gm25846-201ENSMUST00000158013 135 ntBASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Gm26950-201ENSMUST00000182734 498 ntBASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Gm29389-201ENSMUST00000191562 352 ntBASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Gm37177-201ENSMUST00000193768 417 ntBASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Gm43624-201ENSMUST00000197368 180 ntBASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Gm5551-201ENSMUST00000199720 690 ntBASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Gm2602-201ENSMUST00000202112 571 ntBASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Gm7034-201ENSMUST00000218638 645 ntBASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 CT025616.1-201ENSMUST00000221158 412 ntBASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Gm4012-201ENSMUST00000221504 581 ntBASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 AC124826.1-201ENSMUST00000221651 325 ntBASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 AC153794.2-201ENSMUST00000222650 550 ntBASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 AC161609.1-201ENSMUST00000225878 474 ntBASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 AC163646.1-201ENSMUST00000227704 397 ntBASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Gm4779-201ENSMUST00000056225 672 ntTSL 5 BASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Gm24522-201ENSMUST00000083964 108 ntBASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Rgs2-202ENSMUST00000127206 3021 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Olfr1261-204ENSMUST00000216953 3176 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Txlng-202ENSMUST00000112314 3348 ntTSL 2 BASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Gm37485-201ENSMUST00000192326 2953 ntBASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Lrrc4c-203ENSMUST00000162807 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Vmn2r5-202ENSMUST00000177184 2736 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Gm37789-201ENSMUST00000192862 2889 ntBASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Kcnj2-201ENSMUST00000042970 5444 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Pcdh1F7BJK1 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Pcdh1F7BJK1 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
Pcdh1F7BJK1 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC5.01□□□□□ -1.61
Pcdh1F7BJK1 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC5.01□□□□□ -1.61
Pcdh1F7BJK1 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Pcdh1F7BJK1 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Pcdh1F7BJK1 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Pcdh1F7BJK1 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Pcdh1F7BJK1 Med13-201ENSMUST00000043624 10546 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
Pcdh1F7BJK1 Ccr5-202ENSMUST00000111442 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Pcdh1F7BJK1 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Pcdh1F7BJK1 Gm22371-201ENSMUST00000104588 130 ntBASIC5.01□□□□□ -1.61
Pcdh1F7BJK1 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC5.01□□□□□ -1.61
Pcdh1F7BJK1 Gm14750-201ENSMUST00000118262 516 ntBASIC5.01□□□□□ -1.61
Pcdh1F7BJK1 Gm13835-201ENSMUST00000118459 685 ntBASIC5.01□□□□□ -1.61
Pcdh1F7BJK1 Gm11826-201ENSMUST00000118781 438 ntBASIC5.01□□□□□ -1.61
Pcdh1F7BJK1 Clec2f-201ENSMUST00000121051 374 ntBASIC5.01□□□□□ -1.61
Pcdh1F7BJK1 Gm13009-201ENSMUST00000121307 267 ntBASIC5.01□□□□□ -1.61
Pcdh1F7BJK1 Gm13220-201ENSMUST00000121535 508 ntBASIC5.01□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 77.9 ms