Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Cpsf1Q9EPU4 AC123705.2-201ENSMUST00000221653 2009 ntBASIC5.44□□□□□ -1.54
Cpsf1Q9EPU4 4933434E20Rik-201ENSMUST00000029551 3097 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Cpsf1Q9EPU4 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Cpsf1Q9EPU4 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
Cpsf1Q9EPU4 Vmn1r57-202ENSMUST00000227798 2409 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Cpsf1Q9EPU4 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Cpsf1Q9EPU4 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Cpsf1Q9EPU4 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Cpsf1Q9EPU4 Gm13831-201ENSMUST00000118764 302 ntBASIC5.43□□□□□ -1.54
Cpsf1Q9EPU4 Gm14991-201ENSMUST00000119913 598 ntBASIC5.43□□□□□ -1.54
Cpsf1Q9EPU4 Gm11829-201ENSMUST00000121003 282 ntBASIC5.43□□□□□ -1.54
Cpsf1Q9EPU4 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC5.43□□□□□ -1.54
Cpsf1Q9EPU4 Gm22219-201ENSMUST00000157562 319 ntBASIC5.43□□□□□ -1.54
Cpsf1Q9EPU4 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC5.43□□□□□ -1.54
Cpsf1Q9EPU4 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Cpsf1Q9EPU4 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Cpsf1Q9EPU4 Gm29334-201ENSMUST00000190334 357 ntBASIC5.43□□□□□ -1.54
Cpsf1Q9EPU4 1700012D16Rik-201ENSMUST00000197231 577 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Cpsf1Q9EPU4 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC5.43□□□□□ -1.54
Cpsf1Q9EPU4 Gm44686-201ENSMUST00000206776 540 ntTSL 3 BASIC5.43□□□□□ -1.54
Cpsf1Q9EPU4 Gm7786-201ENSMUST00000210494 436 ntBASIC5.43□□□□□ -1.54
Cpsf1Q9EPU4 AC153816.1-201ENSMUST00000217870 764 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Cpsf1Q9EPU4 AC155266.1-201ENSMUST00000220762 904 ntBASIC5.43□□□□□ -1.54
Cpsf1Q9EPU4 AC127270.2-201ENSMUST00000221337 247 ntBASIC5.43□□□□□ -1.54
Cpsf1Q9EPU4 CU024892.1-201ENSMUST00000224869 515 ntBASIC5.43□□□□□ -1.54
Cpsf1Q9EPU4 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Cpsf1Q9EPU4 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Cpsf1Q9EPU4 Olfr713-201ENSMUST00000098139 975 ntBASIC5.43□□□□□ -1.54
Cpsf1Q9EPU4 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Cpsf1Q9EPU4 Gm18954-201ENSMUST00000222200 1792 ntBASIC5.43□□□□□ -1.54
Cpsf1Q9EPU4 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC5.43□□□□□ -1.54
Cpsf1Q9EPU4 Gm4631-202ENSMUST00000121393 4402 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
Cpsf1Q9EPU4 Gm45885-202ENSMUST00000211520 1383 ntBASIC5.43□□□□□ -1.54
Cpsf1Q9EPU4 Dst-215ENSMUST00000185269 16340 ntTSL 5 BASIC5.43□□□□□ -1.54
Cpsf1Q9EPU4 Gm12586-201ENSMUST00000117328 1316 ntBASIC5.42□□□□□ -1.54
Cpsf1Q9EPU4 Gm24976-201ENSMUST00000158972 135 ntBASIC5.42□□□□□ -1.54
Cpsf1Q9EPU4 Gm26556-201ENSMUST00000180645 320 ntBASIC5.42□□□□□ -1.54
Cpsf1Q9EPU4 Gm28263-201ENSMUST00000185884 400 ntBASIC5.42□□□□□ -1.54
Cpsf1Q9EPU4 Gm29327-201ENSMUST00000188229 388 ntTSL 5 BASIC5.42□□□□□ -1.54
Cpsf1Q9EPU4 Gm29232-201ENSMUST00000189100 297 ntTSL 5 BASIC5.42□□□□□ -1.54
Cpsf1Q9EPU4 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC5.42□□□□□ -1.54
Cpsf1Q9EPU4 Gm7119-201ENSMUST00000221345 695 ntBASIC5.42□□□□□ -1.54
Cpsf1Q9EPU4 AC126253.2-201ENSMUST00000226518 205 ntBASIC5.42□□□□□ -1.54
Cpsf1Q9EPU4 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cpsf1Q9EPU4 Nfat5-202ENSMUST00000077440 12773 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
Cpsf1Q9EPU4 Olfr1012-202ENSMUST00000214255 3115 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Cpsf1Q9EPU4 Olfr1312-203ENSMUST00000213961 5345 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Cpsf1Q9EPU4 Gm13100-201ENSMUST00000117157 1439 ntBASIC5.42□□□□□ -1.54
Cpsf1Q9EPU4 AC113059.2-201ENSMUST00000213462 3016 ntBASIC5.42□□□□□ -1.54
Cpsf1Q9EPU4 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Cpsf1Q9EPU4 Gm15261-201ENSMUST00000136779 2763 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Cpsf1Q9EPU4 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Cpsf1Q9EPU4 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Cpsf1Q9EPU4 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC5.42□□□□□ -1.54
Cpsf1Q9EPU4 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Cpsf1Q9EPU4 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Cpsf1Q9EPU4 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cpsf1Q9EPU4 Gm24935-201ENSMUST00000103770 110 ntBASIC5.41□□□□□ -1.54
Cpsf1Q9EPU4 Acbd7-201ENSMUST00000115089 531 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cpsf1Q9EPU4 Gm12693-201ENSMUST00000121965 483 ntBASIC5.41□□□□□ -1.54
Cpsf1Q9EPU4 Gm22889-201ENSMUST00000158639 58 ntBASIC5.41□□□□□ -1.54
Cpsf1Q9EPU4 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC5.41□□□□□ -1.54
Cpsf1Q9EPU4 Gm28118-201ENSMUST00000185957 294 ntBASIC5.41□□□□□ -1.54
Cpsf1Q9EPU4 Gm19214-201ENSMUST00000191956 1083 ntBASIC5.41□□□□□ -1.54
Cpsf1Q9EPU4 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Cpsf1Q9EPU4 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Cpsf1Q9EPU4 Mir193a-201ENSMUST00000083461 66 ntBASIC5.41□□□□□ -1.54
Cpsf1Q9EPU4 Olfr1079-202ENSMUST00000111582 2141 ntAPPRIS ALT2 TSL 3 BASIC5.41□□□□□ -1.54
Cpsf1Q9EPU4 Olfr107-203ENSMUST00000215947 3954 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Cpsf1Q9EPU4 Gm36298-201ENSMUST00000223394 1732 ntBASIC5.41□□□□□ -1.54
Cpsf1Q9EPU4 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Cpsf1Q9EPU4 Olfr205-202ENSMUST00000213910 1650 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Cpsf1Q9EPU4 Iigp1-202ENSMUST00000066912 2938 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Cpsf1Q9EPU4 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Cpsf1Q9EPU4 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Cpsf1Q9EPU4 Gm24982-201ENSMUST00000104456 132 ntBASIC5.4□□□□□ -1.54
Cpsf1Q9EPU4 Olfr1003-ps1-201ENSMUST00000122238 717 ntBASIC5.4□□□□□ -1.54
Cpsf1Q9EPU4 Mir6385-201ENSMUST00000184295 105 ntBASIC5.4□□□□□ -1.54
Cpsf1Q9EPU4 Faiml-202ENSMUST00000188555 560 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Cpsf1Q9EPU4 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC5.4□□□□□ -1.54
Cpsf1Q9EPU4 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC5.4□□□□□ -1.54
Cpsf1Q9EPU4 Gm6240-201ENSMUST00000208014 473 ntBASIC5.4□□□□□ -1.54
Cpsf1Q9EPU4 Olfr167-201ENSMUST00000054606 939 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Cpsf1Q9EPU4 Snora7a-201ENSMUST00000082629 140 ntBASIC5.4□□□□□ -1.54
Cpsf1Q9EPU4 Olfr154-201ENSMUST00000099918 1079 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Cpsf1Q9EPU4 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Cpsf1Q9EPU4 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Cpsf1Q9EPU4 A830019L24Rik-201ENSMUST00000197226 1652 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Cpsf1Q9EPU4 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC5.4□□□□□ -1.54
Cpsf1Q9EPU4 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Cpsf1Q9EPU4 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Cpsf1Q9EPU4 Cfap54-207ENSMUST00000168110 9903 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
Cpsf1Q9EPU4 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Cpsf1Q9EPU4 Gm12379-201ENSMUST00000119607 391 ntBASIC5.4□□□□□ -1.55
Cpsf1Q9EPU4 Gm14775-201ENSMUST00000122089 310 ntBASIC5.4□□□□□ -1.55
Cpsf1Q9EPU4 Mir1903-201ENSMUST00000122574 80 ntBASIC5.4□□□□□ -1.55
Cpsf1Q9EPU4 Tarbp2-207ENSMUST00000142114 420 ntTSL 5 BASIC5.4□□□□□ -1.55
Cpsf1Q9EPU4 Gm25436-201ENSMUST00000158275 145 ntBASIC5.4□□□□□ -1.55
Cpsf1Q9EPU4 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC5.4□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 84.1 ms