Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Gm44193-201ENSMUST00000204822 2523 ntBASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Gm44668-201ENSMUST00000207911 3265 ntBASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Cmah-207ENSMUST00000224657 3124 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Gm11885-201ENSMUST00000118473 1428 ntBASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Mir708-201ENSMUST00000102189 109 ntBASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Gm25760-201ENSMUST00000103989 132 ntBASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Gm13550-201ENSMUST00000118185 525 ntBASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Gm13755-201ENSMUST00000118509 305 ntBASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Gm11582-201ENSMUST00000121041 236 ntBASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Gm24175-201ENSMUST00000158931 129 ntBASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Mir3112-201ENSMUST00000175431 82 ntBASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Gm22259-201ENSMUST00000178926 107 ntBASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Gm25617-201ENSMUST00000179548 133 ntBASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Gm22633-201ENSMUST00000179834 107 ntBASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Gm28835-202ENSMUST00000189206 543 ntTSL 3 BASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Gm38030-201ENSMUST00000192376 475 ntBASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Ighv5-19-201ENSMUST00000193466 297 ntBASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Ass-ps1-201ENSMUST00000197717 761 ntBASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Igkv15-102-201ENSMUST00000197885 287 ntBASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Gm25617-202ENSMUST00000198387 132 ntBASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Mrln-201ENSMUST00000020090 443 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Gm45307-201ENSMUST00000211122 751 ntTSL 3 BASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 CT009527.2-201ENSMUST00000225386 606 ntBASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Gm8256-203ENSMUST00000228692 591 ntBASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Gm10038-201ENSMUST00000077233 441 ntBASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Gm7808-201ENSMUST00000082002 387 ntBASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Gm26263-201ENSMUST00000083281 164 ntBASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 A730017L22Rik-201ENSMUST00000128176 3055 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Gm37864-201ENSMUST00000195308 3075 ntBASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Adam6b-201ENSMUST00000063317 2547 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 AC131687.1-201ENSMUST00000225931 5446 ntBASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Gm43428-201ENSMUST00000200108 3845 ntBASIC6.44□□□□□ -1.38
Pcdhb3Q91XZ7 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Cxcr1-202ENSMUST00000190313 1451 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Gm37527-201ENSMUST00000192406 3547 ntBASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Gm13250-201ENSMUST00000117209 753 ntBASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Gm13046-201ENSMUST00000117391 501 ntBASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Gm14531-201ENSMUST00000120845 285 ntBASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Gm26101-201ENSMUST00000157246 105 ntBASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Gm22219-201ENSMUST00000157562 319 ntBASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Gm24546-201ENSMUST00000158652 102 ntBASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Gm24756-201ENSMUST00000177002 96 ntBASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Mup-ps11-201ENSMUST00000178040 545 ntBASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Gm4761-201ENSMUST00000178086 582 ntBASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Mup-ps3-201ENSMUST00000178315 545 ntBASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Gm38053-201ENSMUST00000193938 160 ntBASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Gm43964-201ENSMUST00000203570 301 ntTSL 3 BASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Gm44279-201ENSMUST00000205154 472 ntBASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Gm45119-201ENSMUST00000207612 199 ntBASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Gm45473-201ENSMUST00000211452 616 ntBASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Gm45704-201ENSMUST00000212582 403 ntBASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 AC127242.3-201ENSMUST00000222009 580 ntBASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Gm6988-201ENSMUST00000222676 375 ntBASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 AC165157.1-201ENSMUST00000222981 580 ntBASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 AC147633.1-201ENSMUST00000225134 259 ntBASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 AV026068-231ENSMUST00000225862 482 ntBASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 AC137961.1-201ENSMUST00000227924 734 ntBASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Gm25482-201ENSMUST00000083225 107 ntBASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Gm38118-201ENSMUST00000192052 2222 ntBASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Pcdhb3Q91XZ7 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms