Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 9430037G07Rik-201ENSMUST00000180723 3177 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Clrn1Q8K445 Cc2d2b-203ENSMUST00000207801 3730 ntTSL 5 BASIC5.01□□□□□ -1.61
Clrn1Q8K445 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
Clrn1Q8K445 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
Clrn1Q8K445 Olfr473-202ENSMUST00000217618 2319 ntAPPRIS P1 TSL 2 BASIC5.01□□□□□ -1.61
Clrn1Q8K445 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Clrn1Q8K445 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Clrn1Q8K445 Gm42955-201ENSMUST00000197355 3393 ntBASIC5.01□□□□□ -1.61
Clrn1Q8K445 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
Clrn1Q8K445 AC120375.2-201ENSMUST00000226532 1853 ntBASIC5□□□□□ -1.61
Clrn1Q8K445 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC5□□□□□ -1.61
Clrn1Q8K445 Gm42484-201ENSMUST00000196075 2104 ntBASIC5□□□□□ -1.61
Clrn1Q8K445 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Clrn1Q8K445 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC5□□□□□ -1.61
Clrn1Q8K445 Gm20342-201ENSMUST00000185480 9720 ntBASIC5□□□□□ -1.61
Clrn1Q8K445 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC5□□□□□ -1.61
Clrn1Q8K445 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC5□□□□□ -1.61
Clrn1Q8K445 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5□□□□□ -1.61
Clrn1Q8K445 AC127371.2-201ENSMUST00000228108 1933 ntBASIC5□□□□□ -1.61
Clrn1Q8K445 Olfr266-202ENSMUST00000213616 2195 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Clrn1Q8K445 Vmn2r-ps120-201ENSMUST00000176341 2409 ntBASIC5□□□□□ -1.61
Clrn1Q8K445 Gm24715-201ENSMUST00000102377 95 ntBASIC5□□□□□ -1.61
Clrn1Q8K445 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5□□□□□ -1.61
Clrn1Q8K445 n-R5s16-201ENSMUST00000104555 119 ntBASIC5□□□□□ -1.61
Clrn1Q8K445 Gm14918-201ENSMUST00000118153 268 ntBASIC5□□□□□ -1.61
Clrn1Q8K445 Gm3943-201ENSMUST00000118606 718 ntBASIC5□□□□□ -1.61
Clrn1Q8K445 Gm7429-201ENSMUST00000118664 348 ntBASIC5□□□□□ -1.61
Clrn1Q8K445 Gm12878-201ENSMUST00000118744 332 ntBASIC5□□□□□ -1.61
Clrn1Q8K445 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC5□□□□□ -1.61
Clrn1Q8K445 Gm12074-201ENSMUST00000120189 219 ntBASIC5□□□□□ -1.61
Clrn1Q8K445 Gm14831-201ENSMUST00000120253 409 ntBASIC5□□□□□ -1.61
Clrn1Q8K445 Gm11677-201ENSMUST00000121349 977 ntBASIC5□□□□□ -1.61
Clrn1Q8K445 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC5□□□□□ -1.61
Clrn1Q8K445 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC5□□□□□ -1.61
Clrn1Q8K445 Scarna13-201ENSMUST00000158164 275 ntBASIC5□□□□□ -1.61
Clrn1Q8K445 Fth-ps2-201ENSMUST00000168364 516 ntBASIC5□□□□□ -1.61
Clrn1Q8K445 Gm25037-201ENSMUST00000175418 110 ntBASIC5□□□□□ -1.61
Clrn1Q8K445 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC5□□□□□ -1.61
Clrn1Q8K445 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
Clrn1Q8K445 Mir6412-201ENSMUST00000184477 97 ntBASIC5□□□□□ -1.61
Clrn1Q8K445 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC5□□□□□ -1.61
Clrn1Q8K445 Gm37503-201ENSMUST00000192088 319 ntBASIC5□□□□□ -1.61
Clrn1Q8K445 Gm37681-201ENSMUST00000193880 727 ntBASIC5□□□□□ -1.61
Clrn1Q8K445 Mir409-201ENSMUST00000198153 79 ntBASIC5□□□□□ -1.61
Clrn1Q8K445 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC5□□□□□ -1.61
Clrn1Q8K445 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC5□□□□□ -1.61
Clrn1Q8K445 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC5□□□□□ -1.61
Clrn1Q8K445 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC5□□□□□ -1.61
Clrn1Q8K445 AC073947.3-201ENSMUST00000215576 766 ntBASIC5□□□□□ -1.61
Clrn1Q8K445 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC5□□□□□ -1.61
Clrn1Q8K445 AC238676.3-201ENSMUST00000223042 154 ntBASIC5□□□□□ -1.61
Clrn1Q8K445 AC154371.1-201ENSMUST00000226600 412 ntBASIC5□□□□□ -1.61
Clrn1Q8K445 AC166574.7-201ENSMUST00000228502 704 ntBASIC5□□□□□ -1.61
Clrn1Q8K445 Fhl5-201ENSMUST00000029922 1106 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Clrn1Q8K445 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC5□□□□□ -1.61
Clrn1Q8K445 Mir129-1-201ENSMUST00000083535 73 ntBASIC5□□□□□ -1.61
Clrn1Q8K445 Rps15a-ps2-201ENSMUST00000087473 393 ntBASIC5□□□□□ -1.61
Clrn1Q8K445 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC5□□□□□ -1.61
Clrn1Q8K445 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Clrn1Q8K445 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC5□□□□□ -1.61
Clrn1Q8K445 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC5□□□□□ -1.61
Clrn1Q8K445 Vmn1r185-203ENSMUST00000227264 5589 ntAPPRIS P1 BASIC5□□□□□ -1.61
Clrn1Q8K445 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Clrn1Q8K445 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Clrn1Q8K445 Ktn1-209ENSMUST00000187262 3913 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Clrn1Q8K445 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
Clrn1Q8K445 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Clrn1Q8K445 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Clrn1Q8K445 Gm43333-201ENSMUST00000198340 2262 ntBASIC4.99□□□□□ -1.61
Clrn1Q8K445 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Clrn1Q8K445 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Clrn1Q8K445 Crebrf-201ENSMUST00000062519 7462 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Clrn1Q8K445 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
Clrn1Q8K445 Spef2-201ENSMUST00000041840 4247 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Clrn1Q8K445 Gm37589-201ENSMUST00000193609 3994 ntBASIC4.99□□□□□ -1.61
Clrn1Q8K445 Gm37779-201ENSMUST00000194221 3380 ntBASIC4.99□□□□□ -1.61
Clrn1Q8K445 Gm23910-201ENSMUST00000104597 132 ntBASIC4.99□□□□□ -1.61
Clrn1Q8K445 Mir208b-201ENSMUST00000104735 77 ntBASIC4.99□□□□□ -1.61
Clrn1Q8K445 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
Clrn1Q8K445 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Clrn1Q8K445 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC4.99□□□□□ -1.61
Clrn1Q8K445 Gm8757-201ENSMUST00000119660 372 ntBASIC4.99□□□□□ -1.61
Clrn1Q8K445 Gm6373-201ENSMUST00000121026 360 ntBASIC4.99□□□□□ -1.61
Clrn1Q8K445 Pdcl2-202ENSMUST00000122213 1049 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Clrn1Q8K445 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC4.99□□□□□ -1.61
Clrn1Q8K445 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC4.99□□□□□ -1.61
Clrn1Q8K445 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC4.99□□□□□ -1.61
Clrn1Q8K445 Gm23465-201ENSMUST00000157134 262 ntBASIC4.99□□□□□ -1.61
Clrn1Q8K445 Gm26350-201ENSMUST00000157531 288 ntBASIC4.99□□□□□ -1.61
Clrn1Q8K445 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Clrn1Q8K445 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Clrn1Q8K445 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC4.99□□□□□ -1.61
Clrn1Q8K445 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Clrn1Q8K445 Gm5709-201ENSMUST00000177879 1165 ntBASIC4.99□□□□□ -1.61
Clrn1Q8K445 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
Clrn1Q8K445 Gm28740-201ENSMUST00000186142 215 ntBASIC4.99□□□□□ -1.61
Clrn1Q8K445 Gm44465-201ENSMUST00000199536 114 ntBASIC4.99□□□□□ -1.61
Clrn1Q8K445 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC4.99□□□□□ -1.61
Clrn1Q8K445 Gm5001-201ENSMUST00000204361 331 ntBASIC4.99□□□□□ -1.61
Clrn1Q8K445 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC4.99□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms