Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm19921-201ENSMUST00000210505 703 ntBASIC6.28□□□□□ -1.4
Trim56Q80VI1 AC115750.1-201ENSMUST00000220441 567 ntBASIC6.28□□□□□ -1.4
Trim56Q80VI1 AC159263.3-201ENSMUST00000223434 460 ntBASIC6.28□□□□□ -1.4
Trim56Q80VI1 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Trim56Q80VI1 Olfr146-201ENSMUST00000073671 1061 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Trim56Q80VI1 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC6.28□□□□□ -1.4
Trim56Q80VI1 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Trim56Q80VI1 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC6.28□□□□□ -1.4
Trim56Q80VI1 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC6.28□□□□□ -1.4
Trim56Q80VI1 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Trim56Q80VI1 Agbl2-204ENSMUST00000111481 3448 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
Trim56Q80VI1 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim56Q80VI1 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim56Q80VI1 Gm37776-201ENSMUST00000193471 2497 ntBASIC6.27□□□□□ -1.4
Trim56Q80VI1 Kcnrg-202ENSMUST00000225582 1821 ntAPPRIS ALT2 BASIC6.27□□□□□ -1.41
Trim56Q80VI1 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC6.27□□□□□ -1.41
Trim56Q80VI1 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trim56Q80VI1 Gm17655-202ENSMUST00000210275 1776 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Trim56Q80VI1 Adam25-201ENSMUST00000096663 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trim56Q80VI1 Sult2a-ps3-201ENSMUST00000117899 428 ntBASIC6.27□□□□□ -1.41
Trim56Q80VI1 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC6.27□□□□□ -1.41
Trim56Q80VI1 Gm14918-201ENSMUST00000118153 268 ntBASIC6.27□□□□□ -1.41
Trim56Q80VI1 Gm11843-201ENSMUST00000118984 425 ntBASIC6.27□□□□□ -1.41
Trim56Q80VI1 Gm12007-201ENSMUST00000120978 597 ntBASIC6.27□□□□□ -1.41
Trim56Q80VI1 Gm12413-201ENSMUST00000121508 312 ntBASIC6.27□□□□□ -1.41
Trim56Q80VI1 Rhox11-ps1-201ENSMUST00000121945 387 ntBASIC6.27□□□□□ -1.41
Trim56Q80VI1 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC6.27□□□□□ -1.41
Trim56Q80VI1 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC6.27□□□□□ -1.41
Trim56Q80VI1 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trim56Q80VI1 Gm23028-201ENSMUST00000158773 265 ntBASIC6.27□□□□□ -1.41
Trim56Q80VI1 Gm19932-201ENSMUST00000177033 313 ntBASIC6.27□□□□□ -1.41
Trim56Q80VI1 Mir7093-201ENSMUST00000184195 101 ntBASIC6.27□□□□□ -1.41
Trim56Q80VI1 Mir6412-201ENSMUST00000184477 97 ntBASIC6.27□□□□□ -1.41
Trim56Q80VI1 Ssxb8-202ENSMUST00000185125 559 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Trim56Q80VI1 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC6.27□□□□□ -1.41
Trim56Q80VI1 Gm2325-201ENSMUST00000186637 581 ntBASIC6.27□□□□□ -1.41
Trim56Q80VI1 Gm6137-201ENSMUST00000187552 578 ntBASIC6.27□□□□□ -1.41
Trim56Q80VI1 Gm18291-201ENSMUST00000190791 301 ntBASIC6.27□□□□□ -1.41
Trim56Q80VI1 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC6.27□□□□□ -1.41
Trim56Q80VI1 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC6.27□□□□□ -1.41
Trim56Q80VI1 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trim56Q80VI1 Gm18891-201ENSMUST00000216734 1087 ntBASIC6.27□□□□□ -1.41
Trim56Q80VI1 Gm6474-201ENSMUST00000223250 699 ntBASIC6.27□□□□□ -1.41
Trim56Q80VI1 Ap3m1-208ENSMUST00000224016 764 ntBASIC6.27□□□□□ -1.41
Trim56Q80VI1 CT573085.1-201ENSMUST00000224279 1197 ntBASIC6.27□□□□□ -1.41
Trim56Q80VI1 AC192333.2-201ENSMUST00000224771 196 ntBASIC6.27□□□□□ -1.41
Trim56Q80VI1 AC131745.2-201ENSMUST00000225736 565 ntBASIC6.27□□□□□ -1.41
Trim56Q80VI1 AC163646.1-201ENSMUST00000227704 397 ntBASIC6.27□□□□□ -1.41
Trim56Q80VI1 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trim56Q80VI1 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Trim56Q80VI1 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Trim56Q80VI1 Gm23456-201ENSMUST00000083335 137 ntBASIC6.27□□□□□ -1.41
Trim56Q80VI1 Mir188-201ENSMUST00000083464 68 ntBASIC6.27□□□□□ -1.41
Trim56Q80VI1 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
Trim56Q80VI1 Gm38118-201ENSMUST00000192052 2222 ntBASIC6.27□□□□□ -1.41
Trim56Q80VI1 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trim56Q80VI1 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC6.27□□□□□ -1.41
Trim56Q80VI1 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gm7646-201ENSMUST00000198590 1346 ntBASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gria4-204ENSMUST00000212533 5207 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim56Q80VI1 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Trim56Q80VI1 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim56Q80VI1 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Trim56Q80VI1 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim56Q80VI1 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim56Q80VI1 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
Trim56Q80VI1 Rfx4-202ENSMUST00000060397 3534 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Trim56Q80VI1 Dlx6os1-201ENSMUST00000159568 4608 ntTSL 5 BASIC6.26□□□□□ -1.41
Trim56Q80VI1 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gm22468-201ENSMUST00000116680 120 ntBASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gm26248-201ENSMUST00000116700 121 ntBASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gm26137-201ENSMUST00000116701 121 ntBASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gm26190-201ENSMUST00000116704 121 ntBASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gm24617-201ENSMUST00000116705 121 ntBASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gm25778-201ENSMUST00000116713 121 ntBASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gm25774-201ENSMUST00000116717 121 ntBASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gm22102-201ENSMUST00000116730 121 ntBASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gm23177-201ENSMUST00000116784 121 ntBASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gm24193-201ENSMUST00000116801 121 ntBASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gm24744-201ENSMUST00000116833 121 ntBASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gm24427-201ENSMUST00000116896 121 ntBASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gm22346-201ENSMUST00000116918 121 ntBASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gm23606-201ENSMUST00000116938 121 ntBASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gm22029-201ENSMUST00000116940 121 ntBASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gm26298-201ENSMUST00000116956 121 ntBASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gm23844-201ENSMUST00000116959 121 ntBASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gm24484-201ENSMUST00000117009 121 ntBASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gm25347-201ENSMUST00000117026 121 ntBASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gm22112-201ENSMUST00000117032 121 ntBASIC6.26□□□□□ -1.41
Trim56Q80VI1 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gm12422-201ENSMUST00000121431 302 ntBASIC6.26□□□□□ -1.41
Trim56Q80VI1 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC6.26□□□□□ -1.41
Trim56Q80VI1 3110004A20Rik-201ENSMUST00000123904 385 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gm22519-201ENSMUST00000158270 178 ntBASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gm22434-201ENSMUST00000158549 122 ntBASIC6.26□□□□□ -1.41
Trim56Q80VI1 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC6.26□□□□□ -1.41
Trim56Q80VI1 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 80.2 ms