Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Kcnu1-201ENSMUST00000098858 3536 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 AC169038.1-201ENSMUST00000227378 1352 ntBASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Trav6n-6-201ENSMUST00000103613 287 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Mir292-201ENSMUST00000104847 82 ntBASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Gm12423-201ENSMUST00000118334 135 ntBASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Mup-ps18-201ENSMUST00000120145 531 ntBASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Olfr404-ps1-201ENSMUST00000121065 972 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Gm12639-201ENSMUST00000121400 493 ntBASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Gm24551-201ENSMUST00000158645 92 ntBASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Vdac2-208ENSMUST00000172727 1291 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Gm21883-201ENSMUST00000179028 372 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Gm20812-201ENSMUST00000179220 684 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Gm21789-201ENSMUST00000179547 372 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Gm21870-201ENSMUST00000179973 372 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Rps19-ps12-201ENSMUST00000181937 430 ntBASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Gm9569-201ENSMUST00000187492 787 ntBASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Gm29552-201ENSMUST00000190548 660 ntBASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Gm29332-201ENSMUST00000190829 227 ntBASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Mirlet7e-201ENSMUST00000196737 93 ntBASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Gm42896-201ENSMUST00000201249 1113 ntBASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Gm42761-201ENSMUST00000201899 738 ntTSL 3 BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Gm43968-201ENSMUST00000203388 389 ntBASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Gm3912-203ENSMUST00000211024 367 ntBASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Ap3m1-208ENSMUST00000224016 764 ntBASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 AC154724.1-201ENSMUST00000225782 821 ntBASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 AC114916.1-201ENSMUST00000228465 494 ntBASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Mir421-201ENSMUST00000083575 76 ntBASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Gm37268-201ENSMUST00000192254 2614 ntBASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Gm37930-201ENSMUST00000194308 1886 ntBASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Gm43092-201ENSMUST00000202986 1854 ntBASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 A230072E10Rik-202ENSMUST00000175825 3292 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Gm45033-201ENSMUST00000206710 3167 ntBASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Zfp182-202ENSMUST00000115333 3130 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Vmn2r-ps123-201ENSMUST00000176763 2410 ntBASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Gm9496-201ENSMUST00000191295 1601 ntBASIC4.83□□□□□ -1.64
Ubfd1Q78JW9 Gm8989-201ENSMUST00000184782 7275 ntBASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 AC164297.6-201ENSMUST00000224643 1568 ntBASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Fign-203ENSMUST00000131615 9734 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Olfr584-202ENSMUST00000214215 3152 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Gm42942-201ENSMUST00000196086 1328 ntBASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Inpp4b-209ENSMUST00000172031 8067 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Trappc1-203ENSMUST00000102602 751 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Gm11409-201ENSMUST00000118621 403 ntBASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Gm13603-201ENSMUST00000119404 83 ntBASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Gm12317-201ENSMUST00000122307 319 ntBASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Gm16035-201ENSMUST00000153879 401 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Gm25846-201ENSMUST00000158013 135 ntBASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Gm24217-201ENSMUST00000158260 133 ntBASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Gm22326-201ENSMUST00000158897 351 ntBASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Gm22776-201ENSMUST00000178634 94 ntBASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Gm23767-201ENSMUST00000179278 94 ntBASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Gm19206-201ENSMUST00000186401 827 ntBASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Gm18667-201ENSMUST00000186523 484 ntBASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Gm37418-201ENSMUST00000195031 274 ntBASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Gm43018-201ENSMUST00000198075 1275 ntBASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Gm43675-201ENSMUST00000199468 1184 ntBASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Gm43700-201ENSMUST00000200967 316 ntTSL 5 BASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Gm44181-201ENSMUST00000203106 483 ntBASIC4.82□□□□□ -1.64
Ubfd1Q78JW9 Gm3148-201ENSMUST00000203594 612 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms