Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC5.77□□□□□ -1.49
Sh3rf1Q69ZI1 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC5.77□□□□□ -1.49
Sh3rf1Q69ZI1 Gm23473-201ENSMUST00000158883 116 ntBASIC5.77□□□□□ -1.49
Sh3rf1Q69ZI1 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC5.77□□□□□ -1.49
Sh3rf1Q69ZI1 Gm26556-201ENSMUST00000180645 320 ntBASIC5.77□□□□□ -1.49
Sh3rf1Q69ZI1 Gm7745-201ENSMUST00000182235 973 ntBASIC5.77□□□□□ -1.49
Sh3rf1Q69ZI1 Gm20770-201ENSMUST00000193474 694 ntBASIC5.77□□□□□ -1.49
Sh3rf1Q69ZI1 Gm35037-201ENSMUST00000203144 506 ntTSL 3 BASIC5.77□□□□□ -1.49
Sh3rf1Q69ZI1 Gm17988-201ENSMUST00000208796 535 ntBASIC5.77□□□□□ -1.49
Sh3rf1Q69ZI1 1300002E11Rik-206ENSMUST00000209728 701 ntTSL 2 BASIC5.77□□□□□ -1.49
Sh3rf1Q69ZI1 Gm45883-201ENSMUST00000210131 853 ntTSL 3 BASIC5.77□□□□□ -1.49
Sh3rf1Q69ZI1 Gm44992-214ENSMUST00000210787 1079 ntTSL 5 BASIC5.77□□□□□ -1.49
Sh3rf1Q69ZI1 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Sh3rf1Q69ZI1 Gm46234-201ENSMUST00000218702 259 ntBASIC5.77□□□□□ -1.49
Sh3rf1Q69ZI1 AC124426.2-201ENSMUST00000220886 404 ntTSL 5 BASIC5.77□□□□□ -1.49
Sh3rf1Q69ZI1 Gm6056-201ENSMUST00000221253 488 ntBASIC5.77□□□□□ -1.49
Sh3rf1Q69ZI1 AC134254.2-201ENSMUST00000221262 170 ntBASIC5.77□□□□□ -1.49
Sh3rf1Q69ZI1 Gm35558-203ENSMUST00000222264 204 ntBASIC5.77□□□□□ -1.49
Sh3rf1Q69ZI1 AC154335.1-201ENSMUST00000224744 395 ntBASIC5.77□□□□□ -1.49
Sh3rf1Q69ZI1 AC170086.1-201ENSMUST00000225190 497 ntBASIC5.77□□□□□ -1.49
Sh3rf1Q69ZI1 AC107711.2-203ENSMUST00000227827 762 ntBASIC5.77□□□□□ -1.49
Sh3rf1Q69ZI1 AC163664.2-201ENSMUST00000228894 459 ntBASIC5.77□□□□□ -1.49
Sh3rf1Q69ZI1 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sh3rf1Q69ZI1 Bglap-201ENSMUST00000076048 440 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sh3rf1Q69ZI1 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Sh3rf1Q69ZI1 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Sh3rf1Q69ZI1 Gm37482-201ENSMUST00000194899 2791 ntBASIC5.77□□□□□ -1.49
Sh3rf1Q69ZI1 Gm42819-201ENSMUST00000199630 5121 ntBASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 1810018F18Rik-203ENSMUST00000189764 1325 ntBASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 AC159326.1-201ENSMUST00000219989 1302 ntBASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Filip1l-201ENSMUST00000099667 1576 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Gm43900-201ENSMUST00000204868 2669 ntBASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Slc28a2-201ENSMUST00000028652 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Spag5-201ENSMUST00000045026 3887 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Olfr670-202ENSMUST00000214216 3729 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Gm22499-201ENSMUST00000104501 135 ntBASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Gm9429-201ENSMUST00000117804 868 ntBASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Gm14115-201ENSMUST00000119242 482 ntBASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Defb44-ps-201ENSMUST00000126871 219 ntBASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 B230112J18Rik-201ENSMUST00000128473 602 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Gm24731-201ENSMUST00000158227 131 ntBASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Rab11a-206ENSMUST00000169058 462 ntTSL 5 BASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 9230113P08Rik-202ENSMUST00000176153 414 ntAPPRIS P5 TSL 5 BASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Gm27024-201ENSMUST00000182561 755 ntBASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Gm27208-201ENSMUST00000184323 604 ntTSL 3 BASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Scgb2b6-201ENSMUST00000188132 330 ntBASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Gm28299-201ENSMUST00000189908 339 ntBASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Gm2142-201ENSMUST00000197899 589 ntBASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 1700110I07Rik-201ENSMUST00000205487 726 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Gm45409-201ENSMUST00000211486 252 ntBASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Gm9269-201ENSMUST00000221661 578 ntBASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Gm17915-201ENSMUST00000222077 548 ntBASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 AC170999.2-201ENSMUST00000226223 264 ntBASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 AC102291.2-201ENSMUST00000228083 367 ntBASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Gm26056-201ENSMUST00000083043 104 ntBASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Gm24029-201ENSMUST00000083928 143 ntBASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 AC124516.1-201ENSMUST00000221845 3544 ntBASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Ktn1-207ENSMUST00000186761 3902 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Il1rl2-204ENSMUST00000194296 3908 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 Adam39-201ENSMUST00000066814 2636 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Sh3rf1Q69ZI1 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Fam107b-209ENSMUST00000226435 3602 ntBASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Myo1b-204ENSMUST00000114541 4616 ntTSL 5 BASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Gm14391-204ENSMUST00000109058 1854 ntAPPRIS P1 TSL 3 BASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Robo2-203ENSMUST00000117785 8124 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 AC116557.1-201ENSMUST00000219494 1521 ntBASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Gm10723-201ENSMUST00000195366 6918 ntBASIC5.75□□□□□ -1.49
Sh3rf1Q69ZI1 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 77.2 ms