Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Olfr629-203ENSMUST00000216300 2277 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Ush2AQ2QI47 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Ush2AQ2QI47 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
Ush2AQ2QI47 Gm16436-201ENSMUST00000121510 1607 ntBASIC2.06□□□□□ -2.08
Ush2AQ2QI47 Gm33148-201ENSMUST00000210835 7227 ntTSL 5 BASIC2.06□□□□□ -2.08
Ush2AQ2QI47 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Ush2AQ2QI47 Cntnap2-205ENSMUST00000199100 6279 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Ush2AQ2QI47 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC2.06□□□□□ -2.08
Ush2AQ2QI47 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC2.06□□□□□ -2.08
Ush2AQ2QI47 Gm25436-201ENSMUST00000158275 145 ntBASIC2.06□□□□□ -2.08
Ush2AQ2QI47 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC2.06□□□□□ -2.08
Ush2AQ2QI47 Gm4859-201ENSMUST00000199625 787 ntBASIC2.06□□□□□ -2.08
Ush2AQ2QI47 AC154239.2-201ENSMUST00000227859 233 ntBASIC2.06□□□□□ -2.08
Ush2AQ2QI47 Gm25636-201ENSMUST00000082666 133 ntBASIC2.06□□□□□ -2.08
Ush2AQ2QI47 Gm43844-201ENSMUST00000202926 5605 ntBASIC2.06□□□□□ -2.08
Ush2AQ2QI47 Ankrd11-201ENSMUST00000098333 7995 ntAPPRIS ALT2 TSL 5 BASIC2.06□□□□□ -2.08
Ush2AQ2QI47 Thrb-202ENSMUST00000022304 6200 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
Ush2AQ2QI47 Ppef1-201ENSMUST00000071204 2483 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
Ush2AQ2QI47 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Ush2AQ2QI47 Ank3-231ENSMUST00000182884 9963 ntAPPRIS P4 TSL 1 (best) BASIC2.06□□□□□ -2.08
Ush2AQ2QI47 Dock7-214ENSMUST00000205650 6297 ntAPPRIS P3 TSL 5 BASIC2.06□□□□□ -2.08
Ush2AQ2QI47 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC2.06□□□□□ -2.08
Ush2AQ2QI47 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Ush2AQ2QI47 Gm14681-201ENSMUST00000118047 411 ntBASIC2.06□□□□□ -2.08
Ush2AQ2QI47 Gm29161-201ENSMUST00000188250 699 ntBASIC2.06□□□□□ -2.08
Ush2AQ2QI47 AC091783.4-201ENSMUST00000224940 611 ntBASIC2.06□□□□□ -2.08
Ush2AQ2QI47 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC2.06□□□□□ -2.08
Ush2AQ2QI47 AC149588.1-201ENSMUST00000228274 3745 ntBASIC2.06□□□□□ -2.08
Ush2AQ2QI47 Rbbp6-201ENSMUST00000052135 6184 ntAPPRIS P2 TSL 5 BASIC2.06□□□□□ -2.08
Ush2AQ2QI47 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Ush2AQ2QI47 Gm8700-201ENSMUST00000222187 3054 ntBASIC2.06□□□□□ -2.08
Ush2AQ2QI47 Gm42842-201ENSMUST00000197736 3004 ntBASIC2.06□□□□□ -2.08
Ush2AQ2QI47 Zfp870-201ENSMUST00000178401 5126 ntTSL 5 BASIC2.06□□□□□ -2.08
Ush2AQ2QI47 Nrxn3-205ENSMUST00000163134 7922 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
Ush2AQ2QI47 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
Ush2AQ2QI47 Gm14627-201ENSMUST00000118931 567 ntBASIC2.05□□□□□ -2.08
Ush2AQ2QI47 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Gm43436-201ENSMUST00000199308 147 ntBASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Gm45269-201ENSMUST00000210359 282 ntBASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Gm6842-201ENSMUST00000211361 390 ntBASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Tas2r136-201ENSMUST00000065532 984 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Mir34b-201ENSMUST00000083558 84 ntBASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Olfr97-204ENSMUST00000214622 1573 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Olfr542-ps1-202ENSMUST00000218525 4039 ntTSL 5 BASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Exoc5-207ENSMUST00000162175 12699 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Gm21955-201ENSMUST00000194137 4968 ntBASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Gm6300-201ENSMUST00000192393 1498 ntBASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Gm22219-201ENSMUST00000157562 319 ntBASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Vmn1r139-202ENSMUST00000173668 753 ntTSL 3 BASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Gm21244-201ENSMUST00000178447 684 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Gm21803-201ENSMUST00000188897 693 ntBASIC2.05□□□□□ -2.08
Ush2AQ2QI47 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Gm29038-201ENSMUST00000191543 678 ntBASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Cyp2b26-ps-201ENSMUST00000206238 1090 ntBASIC2.05□□□□□ -2.08
Ush2AQ2QI47 AC153971.2-201ENSMUST00000214553 777 ntBASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Gm24626-201ENSMUST00000082621 161 ntBASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Gm46199-201ENSMUST00000220373 1693 ntBASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Gm7697-201ENSMUST00000201500 2507 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Vmn1r220-202ENSMUST00000226651 6252 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Gm37776-201ENSMUST00000193471 2497 ntBASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Tsga10-204ENSMUST00000123082 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Atf7ip-201ENSMUST00000032335 8059 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Gm24119-201ENSMUST00000103979 246 ntBASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Jpx-201ENSMUST00000181020 3802 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Gm27828-201ENSMUST00000184108 119 ntBASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Gm19503-201ENSMUST00000187109 241 ntBASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Gm8681-201ENSMUST00000219115 618 ntBASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Srgap2-201ENSMUST00000097588 8026 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Cdkl5-205ENSMUST00000198931 9796 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
Ush2AQ2QI47 CT009504.2-201ENSMUST00000217951 2960 ntTSL 5 BASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Vmn2r104-201ENSMUST00000168050 2583 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Ush2AQ2QI47 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Ush2AQ2QI47 C79798-201ENSMUST00000131588 1793 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Mir99ahg-201ENSMUST00000068704 2858 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Gm15304-201ENSMUST00000122150 2640 ntBASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Gm21037-201ENSMUST00000209086 2608 ntBASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Gm22227-201ENSMUST00000157356 259 ntBASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Olfr762-ps1-201ENSMUST00000172948 927 ntBASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Snord15a-201ENSMUST00000083888 148 ntBASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Stag2-203ENSMUST00000115073 6171 ntTSL 5 BASIC2.05□□□□□ -2.08
Ush2AQ2QI47 Sema5a-201ENSMUST00000067458 10809 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
Retrieved 100 of 76,532 protein–RNA pairs in 80.1 ms