Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm11583-201ENSMUST00000132296 466 ntTSL 5 BASIC7.04□□□□□ -1.28
Col17a1Q07563 Gm16290-201ENSMUST00000161175 474 ntBASIC7.04□□□□□ -1.28
Col17a1Q07563 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Col17a1Q07563 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Col17a1Q07563 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Col17a1Q07563 Gm8676-201ENSMUST00000184206 637 ntBASIC7.04□□□□□ -1.28
Col17a1Q07563 Gm29320-201ENSMUST00000185235 615 ntBASIC7.04□□□□□ -1.28
Col17a1Q07563 Gm2617-201ENSMUST00000185690 1066 ntBASIC7.04□□□□□ -1.28
Col17a1Q07563 Gm29179-202ENSMUST00000186138 615 ntBASIC7.04□□□□□ -1.28
Col17a1Q07563 Gm28598-201ENSMUST00000186490 615 ntBASIC7.04□□□□□ -1.28
Col17a1Q07563 Gm29448-201ENSMUST00000186675 615 ntBASIC7.04□□□□□ -1.28
Col17a1Q07563 Gm29314-201ENSMUST00000186800 615 ntBASIC7.04□□□□□ -1.28
Col17a1Q07563 Gm28253-202ENSMUST00000187971 615 ntBASIC7.04□□□□□ -1.28
Col17a1Q07563 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col17a1Q07563 Gm29268-201ENSMUST00000188669 615 ntBASIC7.04□□□□□ -1.28
Col17a1Q07563 Gm29169-201ENSMUST00000189835 615 ntBASIC7.04□□□□□ -1.28
Col17a1Q07563 Gm4322-201ENSMUST00000191094 336 ntBASIC7.04□□□□□ -1.28
Col17a1Q07563 Gm28978-201ENSMUST00000191120 615 ntBASIC7.04□□□□□ -1.28
Col17a1Q07563 Gm37172-201ENSMUST00000191926 615 ntBASIC7.04□□□□□ -1.28
Col17a1Q07563 Igkv13-61-1-201ENSMUST00000198255 296 ntBASIC7.04□□□□□ -1.28
Col17a1Q07563 Gm44690-201ENSMUST00000207984 382 ntBASIC7.04□□□□□ -1.28
Col17a1Q07563 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC7.04□□□□□ -1.28
Col17a1Q07563 Olfr873-201ENSMUST00000053919 1062 ntAPPRIS P2 BASIC7.04□□□□□ -1.28
Col17a1Q07563 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Col17a1Q07563 Vaultrc5-201ENSMUST00000083211 143 ntBASIC7.04□□□□□ -1.28
Col17a1Q07563 Gm23102-201ENSMUST00000083724 116 ntBASIC7.04□□□□□ -1.28
Col17a1Q07563 Dock10-201ENSMUST00000077946 7198 ntAPPRIS P3 TSL 5 BASIC7.04□□□□□ -1.28
Col17a1Q07563 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col17a1Q07563 Gm43844-201ENSMUST00000202926 5605 ntBASIC7.04□□□□□ -1.28
Col17a1Q07563 Gm20775-201ENSMUST00000100115 1851 ntBASIC7.04□□□□□ -1.28
Col17a1Q07563 Gm43462-201ENSMUST00000200265 3648 ntBASIC7.04□□□□□ -1.28
Col17a1Q07563 9830107B12Rik-201ENSMUST00000063481 3639 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col17a1Q07563 Lingo2-210ENSMUST00000164772 3562 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col17a1Q07563 Rnf24-201ENSMUST00000059372 5978 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col17a1Q07563 Hspd1-ps2-201ENSMUST00000210003 1697 ntBASIC7.04□□□□□ -1.28
Col17a1Q07563 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col17a1Q07563 Sel1l2-202ENSMUST00000122367 2216 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col17a1Q07563 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col17a1Q07563 Gm7853-201ENSMUST00000100708 478 ntBASIC7.04□□□□□ -1.28
Col17a1Q07563 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC7.04□□□□□ -1.28
Col17a1Q07563 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC7.04□□□□□ -1.28
Col17a1Q07563 Gm23819-201ENSMUST00000158744 109 ntBASIC7.04□□□□□ -1.28
Col17a1Q07563 Gm16026-202ENSMUST00000159695 772 ntBASIC7.04□□□□□ -1.28
Col17a1Q07563 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col17a1Q07563 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC7.04□□□□□ -1.28
Col17a1Q07563 Gm30954-201ENSMUST00000208715 1210 ntTSL 5 BASIC7.04□□□□□ -1.28
Col17a1Q07563 AC111046.1-201ENSMUST00000217715 412 ntBASIC7.04□□□□□ -1.28
Col17a1Q07563 Gm7240-201ENSMUST00000220769 664 ntBASIC7.04□□□□□ -1.28
Col17a1Q07563 AC163621.2-201ENSMUST00000222229 682 ntBASIC7.04□□□□□ -1.28
Col17a1Q07563 AC156803.1-201ENSMUST00000224407 820 ntBASIC7.04□□□□□ -1.28
Col17a1Q07563 AC099612.2-201ENSMUST00000226824 721 ntBASIC7.04□□□□□ -1.28
Col17a1Q07563 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Col17a1Q07563 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC7.04□□□□□ -1.28
Col17a1Q07563 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Col17a1Q07563 6430511E19Rik-201ENSMUST00000192772 3835 ntBASIC7.03□□□□□ -1.28
Col17a1Q07563 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC7.03□□□□□ -1.28
Col17a1Q07563 Rc3h2-201ENSMUST00000100143 8799 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Col17a1Q07563 Cfap97-206ENSMUST00000164504 4521 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col17a1Q07563 Cnot4-203ENSMUST00000114993 3473 ntAPPRIS P4 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col17a1Q07563 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col17a1Q07563 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Col17a1Q07563 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col17a1Q07563 Gm19131-202ENSMUST00000203464 3208 ntBASIC7.03□□□□□ -1.28
Col17a1Q07563 Gm45322-201ENSMUST00000211642 1361 ntBASIC7.03□□□□□ -1.28
Col17a1Q07563 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
Col17a1Q07563 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col17a1Q07563 Klra7-204ENSMUST00000112013 1104 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Col17a1Q07563 Gm7219-201ENSMUST00000119619 297 ntBASIC7.03□□□□□ -1.28
Col17a1Q07563 Gm14463-201ENSMUST00000121117 498 ntBASIC7.03□□□□□ -1.28
Col17a1Q07563 Gm11260-201ENSMUST00000121163 942 ntBASIC7.03□□□□□ -1.28
Col17a1Q07563 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC7.03□□□□□ -1.28
Col17a1Q07563 Gm16125-201ENSMUST00000159003 339 ntBASIC7.03□□□□□ -1.28
Col17a1Q07563 Gm6264-202ENSMUST00000162896 1217 ntBASIC7.03□□□□□ -1.28
Col17a1Q07563 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Col17a1Q07563 Gm10087-201ENSMUST00000167650 330 ntBASIC7.03□□□□□ -1.28
Col17a1Q07563 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Col17a1Q07563 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC7.03□□□□□ -1.28
Col17a1Q07563 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC7.03□□□□□ -1.28
Col17a1Q07563 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC7.03□□□□□ -1.28
Col17a1Q07563 Gm28927-201ENSMUST00000191528 272 ntBASIC7.03□□□□□ -1.28
Col17a1Q07563 Mir703-201ENSMUST00000197105 109 ntBASIC7.03□□□□□ -1.28
Col17a1Q07563 Gm8069-201ENSMUST00000197887 154 ntBASIC7.03□□□□□ -1.28
Col17a1Q07563 Gm43344-201ENSMUST00000198723 1229 ntBASIC7.03□□□□□ -1.28
Col17a1Q07563 Gm43217-201ENSMUST00000199513 367 ntBASIC7.03□□□□□ -1.28
Col17a1Q07563 Gm39154-201ENSMUST00000210257 560 ntTSL 5 BASIC7.03□□□□□ -1.28
Col17a1Q07563 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC7.03□□□□□ -1.28
Col17a1Q07563 AC154635.1-201ENSMUST00000221433 400 ntTSL 3 BASIC7.03□□□□□ -1.28
Col17a1Q07563 AC154636.3-201ENSMUST00000221489 1214 ntBASIC7.03□□□□□ -1.28
Col17a1Q07563 Platr25-208ENSMUST00000222602 939 ntBASIC7.03□□□□□ -1.28
Col17a1Q07563 AC239878.2-201ENSMUST00000224048 464 ntBASIC7.03□□□□□ -1.28
Col17a1Q07563 CT030684.2-201ENSMUST00000228946 826 ntBASIC7.03□□□□□ -1.28
Col17a1Q07563 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC7.03□□□□□ -1.28
Col17a1Q07563 Tas2r131-201ENSMUST00000082085 1036 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Col17a1Q07563 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Col17a1Q07563 Olfr1160-201ENSMUST00000099839 960 ntBASIC7.03□□□□□ -1.28
Col17a1Q07563 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC7.03□□□□□ -1.28
Col17a1Q07563 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col17a1Q07563 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC7.03□□□□□ -1.28
Col17a1Q07563 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col17a1Q07563 Vmn1r175-202ENSMUST00000228383 2878 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms