Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC4.49□□□□□ -1.69
Col2a1P28481 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC4.49□□□□□ -1.69
Col2a1P28481 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Col2a1P28481 Rhoay-ps1-201ENSMUST00000191243 581 ntBASIC4.49□□□□□ -1.69
Col2a1P28481 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC4.49□□□□□ -1.69
Col2a1P28481 Gm37343-201ENSMUST00000192542 111 ntBASIC4.49□□□□□ -1.69
Col2a1P28481 Gm43617-201ENSMUST00000196418 606 ntTSL 2 BASIC4.49□□□□□ -1.69
Col2a1P28481 Gm42470-201ENSMUST00000198086 251 ntTSL 3 BASIC4.49□□□□□ -1.69
Col2a1P28481 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC4.49□□□□□ -1.69
Col2a1P28481 Gm7587-201ENSMUST00000207618 1021 ntBASIC4.49□□□□□ -1.69
Col2a1P28481 Gm18944-201ENSMUST00000207672 643 ntBASIC4.49□□□□□ -1.69
Col2a1P28481 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC4.49□□□□□ -1.69
Col2a1P28481 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC4.49□□□□□ -1.69
Col2a1P28481 AC125379.1-201ENSMUST00000221928 111 ntBASIC4.49□□□□□ -1.69
Col2a1P28481 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC4.49□□□□□ -1.69
Col2a1P28481 AC124581.4-201ENSMUST00000225874 463 ntBASIC4.49□□□□□ -1.69
Col2a1P28481 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Col2a1P28481 Scrg1-201ENSMUST00000034023 700 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Col2a1P28481 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Col2a1P28481 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Col2a1P28481 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Col2a1P28481 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Col2a1P28481 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Col2a1P28481 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.48□□□□□ -1.69
Col2a1P28481 Gm38207-201ENSMUST00000193009 3505 ntBASIC4.48□□□□□ -1.69
Col2a1P28481 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
Col2a1P28481 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Col2a1P28481 Gm43831-201ENSMUST00000200461 2598 ntBASIC4.48□□□□□ -1.69
Col2a1P28481 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
Col2a1P28481 Matr3-ps2-201ENSMUST00000160839 1996 ntBASIC4.48□□□□□ -1.69
Col2a1P28481 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Col2a1P28481 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col2a1P28481 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Col2a1P28481 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col2a1P28481 Gm13831-201ENSMUST00000118764 302 ntBASIC4.48□□□□□ -1.69
Col2a1P28481 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
Col2a1P28481 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC4.48□□□□□ -1.69
Col2a1P28481 Gm23168-201ENSMUST00000157156 143 ntBASIC4.48□□□□□ -1.69
Col2a1P28481 Gm23540-201ENSMUST00000157543 164 ntBASIC4.48□□□□□ -1.69
Col2a1P28481 Gm25369-201ENSMUST00000158848 132 ntBASIC4.48□□□□□ -1.69
Col2a1P28481 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col2a1P28481 Trav14n-1-201ENSMUST00000177578 340 ntAPPRIS ALT2 BASIC4.48□□□□□ -1.69
Col2a1P28481 Gm28975-201ENSMUST00000186412 686 ntBASIC4.48□□□□□ -1.69
Col2a1P28481 Trav14d-1-202ENSMUST00000187138 340 ntAPPRIS ALT2 BASIC4.48□□□□□ -1.69
Col2a1P28481 2010005H15Rik-203ENSMUST00000187742 466 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col2a1P28481 Trbv28-201ENSMUST00000192804 264 ntBASIC4.48□□□□□ -1.69
Col2a1P28481 Gm8023-201ENSMUST00000195298 903 ntBASIC4.48□□□□□ -1.69
Col2a1P28481 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC4.48□□□□□ -1.69
Col2a1P28481 Gm7119-201ENSMUST00000221345 695 ntBASIC4.48□□□□□ -1.69
Col2a1P28481 Gm8231-201ENSMUST00000221617 783 ntBASIC4.48□□□□□ -1.69
Col2a1P28481 Vmn1r89-206ENSMUST00000227319 985 ntBASIC4.48□□□□□ -1.69
Col2a1P28481 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col2a1P28481 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col2a1P28481 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Col2a1P28481 Pramel6-202ENSMUST00000111572 1781 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col2a1P28481 Gm45540-201ENSMUST00000209271 3606 ntBASIC4.48□□□□□ -1.69
Col2a1P28481 Zfp120-201ENSMUST00000089207 4127 ntAPPRIS P2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col2a1P28481 Gm5248-201ENSMUST00000186108 4046 ntBASIC4.47□□□□□ -1.69
Col2a1P28481 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.47□□□□□ -1.69
Col2a1P28481 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Col2a1P28481 Gm2396-202ENSMUST00000188232 3433 ntTSL 5 BASIC4.47□□□□□ -1.69
Col2a1P28481 Gm26696-201ENSMUST00000181941 2848 ntBASIC4.47□□□□□ -1.69
Col2a1P28481 Cmah-206ENSMUST00000167746 9727 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col2a1P28481 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col2a1P28481 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Col2a1P28481 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Col2a1P28481 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Col2a1P28481 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.47□□□□□ -1.69
Col2a1P28481 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.47□□□□□ -1.69
Col2a1P28481 Gm11893-201ENSMUST00000117829 491 ntBASIC4.47□□□□□ -1.69
Col2a1P28481 Gm15613-201ENSMUST00000118396 326 ntBASIC4.47□□□□□ -1.69
Col2a1P28481 4931428L18Rik-202ENSMUST00000135245 889 ntAPPRIS P5 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col2a1P28481 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC4.47□□□□□ -1.69
Col2a1P28481 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Col2a1P28481 Gm8298-201ENSMUST00000179799 1206 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Col2a1P28481 Gm29334-201ENSMUST00000190334 357 ntBASIC4.47□□□□□ -1.69
Col2a1P28481 Gm18330-201ENSMUST00000199246 547 ntBASIC4.47□□□□□ -1.69
Col2a1P28481 Gm42926-201ENSMUST00000200496 697 ntBASIC4.47□□□□□ -1.69
Col2a1P28481 Gm30717-201ENSMUST00000206549 494 ntTSL 5 BASIC4.47□□□□□ -1.69
Col2a1P28481 Gm44754-201ENSMUST00000208155 400 ntBASIC4.47□□□□□ -1.69
Col2a1P28481 Gm25007-201ENSMUST00000083808 133 ntBASIC4.47□□□□□ -1.69
Col2a1P28481 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC4.47□□□□□ -1.69
Col2a1P28481 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC4.47□□□□□ -1.69
Col2a1P28481 Gm43872-201ENSMUST00000203218 2213 ntBASIC4.47□□□□□ -1.69
Col2a1P28481 Gm884-201ENSMUST00000059279 10977 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col2a1P28481 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Col2a1P28481 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Col2a1P28481 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
Col2a1P28481 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Col2a1P28481 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
Col2a1P28481 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Col2a1P28481 Gm45160-201ENSMUST00000207112 3099 ntBASIC4.46□□□□□ -1.7
Col2a1P28481 Vwc2l-203ENSMUST00000161937 4323 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Col2a1P28481 Serpinb3c-201ENSMUST00000027565 1659 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Col2a1P28481 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Col2a1P28481 Mir676-201ENSMUST00000102443 89 ntBASIC4.46□□□□□ -1.7
Col2a1P28481 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC4.46□□□□□ -1.7
Col2a1P28481 Gm6031-201ENSMUST00000121314 1054 ntBASIC4.46□□□□□ -1.7
Col2a1P28481 Gm24898-201ENSMUST00000158133 106 ntBASIC4.46□□□□□ -1.7
Col2a1P28481 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.46□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms