Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Gm38330-201ENSMUST00000192743 959 ntBASIC3.67□□□□□ -1.82
Cdx1P18111 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC3.67□□□□□ -1.82
Cdx1P18111 Gm19617-201ENSMUST00000202977 308 ntBASIC3.67□□□□□ -1.82
Cdx1P18111 Gm44389-201ENSMUST00000203795 182 ntBASIC3.67□□□□□ -1.82
Cdx1P18111 Gm9560-201ENSMUST00000205012 1201 ntBASIC3.67□□□□□ -1.82
Cdx1P18111 Gm45078-201ENSMUST00000205343 546 ntBASIC3.67□□□□□ -1.82
Cdx1P18111 Gm3816-201ENSMUST00000209803 433 ntBASIC3.67□□□□□ -1.82
Cdx1P18111 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC3.67□□□□□ -1.82
Cdx1P18111 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Cdx1P18111 Gm39302-201ENSMUST00000215184 636 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Cdx1P18111 AC131720.3-201ENSMUST00000219113 275 ntBASIC3.67□□□□□ -1.82
Cdx1P18111 Fkbp1b-202ENSMUST00000219880 246 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Cdx1P18111 Gm46369-201ENSMUST00000221577 401 ntBASIC3.67□□□□□ -1.82
Cdx1P18111 AC153662.1-201ENSMUST00000222220 270 ntBASIC3.67□□□□□ -1.82
Cdx1P18111 AC173481.1-201ENSMUST00000223351 270 ntBASIC3.67□□□□□ -1.82
Cdx1P18111 Gm2645-201ENSMUST00000223516 547 ntBASIC3.67□□□□□ -1.82
Cdx1P18111 AC129935.1-201ENSMUST00000226302 873 ntBASIC3.67□□□□□ -1.82
Cdx1P18111 AC158142.1-201ENSMUST00000226721 416 ntBASIC3.67□□□□□ -1.82
Cdx1P18111 Olfr1437-201ENSMUST00000052558 1177 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Cdx1P18111 Gm22826-201ENSMUST00000083774 165 ntBASIC3.67□□□□□ -1.82
Cdx1P18111 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Cdx1P18111 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Cdx1P18111 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC3.67□□□□□ -1.82
Cdx1P18111 4930528J11Rik-201ENSMUST00000201689 3611 ntBASIC3.67□□□□□ -1.82
Cdx1P18111 Olfr1326-ps1-201ENSMUST00000059880 3637 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Cdx1P18111 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
Cdx1P18111 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Cdx1P18111 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Cdx1P18111 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Cdx1P18111 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
Cdx1P18111 Gm43374-201ENSMUST00000202498 2391 ntBASIC3.67□□□□□ -1.82
Cdx1P18111 AC158921.1-201ENSMUST00000227861 3468 ntBASIC3.67□□□□□ -1.82
Cdx1P18111 Gm37115-201ENSMUST00000193750 2849 ntBASIC3.66□□□□□ -1.82
Cdx1P18111 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC3.66□□□□□ -1.82
Cdx1P18111 A230057D06Rik-202ENSMUST00000207061 3717 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Cdx1P18111 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC3.66□□□□□ -1.82
Cdx1P18111 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Cdx1P18111 Gm43047-201ENSMUST00000200089 3460 ntBASIC3.66□□□□□ -1.82
Cdx1P18111 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Cdx1P18111 Gm14221-201ENSMUST00000109473 340 ntTSL 3 BASIC3.66□□□□□ -1.82
Cdx1P18111 Gm11905-201ENSMUST00000117653 678 ntBASIC3.66□□□□□ -1.82
Cdx1P18111 Mup-ps18-201ENSMUST00000120145 531 ntBASIC3.66□□□□□ -1.82
Cdx1P18111 Gm1866-201ENSMUST00000120701 477 ntBASIC3.66□□□□□ -1.82
Cdx1P18111 Gm13865-201ENSMUST00000120957 865 ntBASIC3.66□□□□□ -1.82
Cdx1P18111 Gm14986-201ENSMUST00000121262 1002 ntBASIC3.66□□□□□ -1.82
Cdx1P18111 Gm12224-202ENSMUST00000127107 726 ntTSL 3 BASIC3.66□□□□□ -1.82
Cdx1P18111 Gm12854-201ENSMUST00000128518 297 ntBASIC3.66□□□□□ -1.82
Cdx1P18111 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC3.66□□□□□ -1.82
Cdx1P18111 Gm23496-201ENSMUST00000157741 248 ntBASIC3.66□□□□□ -1.82
Cdx1P18111 Gm17075-201ENSMUST00000171924 670 ntBASIC3.66□□□□□ -1.82
Cdx1P18111 Mir6393-201ENSMUST00000183709 94 ntBASIC3.66□□□□□ -1.82
Cdx1P18111 Gm2497-201ENSMUST00000189539 601 ntBASIC3.66□□□□□ -1.82
Cdx1P18111 Gm42999-201ENSMUST00000198049 786 ntBASIC3.66□□□□□ -1.82
Cdx1P18111 Mir7682-201ENSMUST00000198467 58 ntBASIC3.66□□□□□ -1.82
Cdx1P18111 Mir5121-201ENSMUST00000198528 74 ntBASIC3.66□□□□□ -1.82
Cdx1P18111 Gm43424-201ENSMUST00000200484 253 ntBASIC3.66□□□□□ -1.82
Cdx1P18111 Gm18100-201ENSMUST00000200897 452 ntBASIC3.66□□□□□ -1.82
Cdx1P18111 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Cdx1P18111 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC3.66□□□□□ -1.82
Cdx1P18111 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Cdx1P18111 AC132384.6-201ENSMUST00000218976 1206 ntBASIC3.66□□□□□ -1.82
Cdx1P18111 Gm29774-201ENSMUST00000219270 436 ntBASIC3.66□□□□□ -1.82
Cdx1P18111 AC132384.13-201ENSMUST00000219556 1159 ntBASIC3.66□□□□□ -1.82
Cdx1P18111 AC155266.1-201ENSMUST00000220762 904 ntBASIC3.66□□□□□ -1.82
Cdx1P18111 AC133498.1-203ENSMUST00000221213 668 ntTSL 3 BASIC3.66□□□□□ -1.82
Cdx1P18111 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Cdx1P18111 Olfr1013-201ENSMUST00000065626 918 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Cdx1P18111 Gm10115-201ENSMUST00000076071 1228 ntBASIC3.66□□□□□ -1.82
Cdx1P18111 Olfr1014-201ENSMUST00000076250 918 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Cdx1P18111 Gm7665-201ENSMUST00000076710 297 ntBASIC3.66□□□□□ -1.82
Cdx1P18111 Gm25800-201ENSMUST00000082636 134 ntBASIC3.66□□□□□ -1.82
Cdx1P18111 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Cdx1P18111 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Cdx1P18111 Gm38374-201ENSMUST00000194417 2033 ntBASIC3.66□□□□□ -1.82
Cdx1P18111 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Cdx1P18111 Gm37045-201ENSMUST00000192016 2463 ntBASIC3.66□□□□□ -1.82
Cdx1P18111 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC3.66□□□□□ -1.82
Cdx1P18111 Gm10727-201ENSMUST00000197107 1602 ntBASIC3.66□□□□□ -1.82
Cdx1P18111 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Cdx1P18111 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC3.65□□□□□ -1.82
Cdx1P18111 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC3.65□□□□□ -1.82
Cdx1P18111 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
Cdx1P18111 Gm44525-201ENSMUST00000183129 2634 ntBASIC3.65□□□□□ -1.82
Cdx1P18111 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC3.65□□□□□ -1.82
Cdx1P18111 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
Cdx1P18111 AC170999.1-201ENSMUST00000226359 1585 ntBASIC3.65□□□□□ -1.82
Cdx1P18111 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Cdx1P18111 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Cdx1P18111 Gm23322-201ENSMUST00000104464 167 ntBASIC3.65□□□□□ -1.83
Cdx1P18111 Gm14444-202ENSMUST00000109070 1281 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.83
Cdx1P18111 Ctps2-203ENSMUST00000112300 741 ntTSL 3 BASIC3.65□□□□□ -1.83
Cdx1P18111 Gm14352-201ENSMUST00000119250 449 ntBASIC3.65□□□□□ -1.83
Cdx1P18111 Gm15388-201ENSMUST00000121578 726 ntBASIC3.65□□□□□ -1.83
Cdx1P18111 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC3.65□□□□□ -1.83
Cdx1P18111 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Cdx1P18111 Gm15905-201ENSMUST00000137042 298 ntBASIC3.65□□□□□ -1.83
Cdx1P18111 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC3.65□□□□□ -1.83
Cdx1P18111 Gm24188-201ENSMUST00000157980 108 ntBASIC3.65□□□□□ -1.83
Cdx1P18111 Gm22726-201ENSMUST00000158089 179 ntBASIC3.65□□□□□ -1.83
Cdx1P18111 Mir1947-201ENSMUST00000158235 85 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms