Protein–RNA interactions for Protein: Q9CWY9

Rpain, RPA-interacting protein, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpainQ9CWY9 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC5.58□□□□□ -1.52
RpainQ9CWY9 Gm28188-201ENSMUST00000190483 236 ntBASIC5.58□□□□□ -1.52
RpainQ9CWY9 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RpainQ9CWY9 Gm29130-201ENSMUST00000191015 618 ntTSL 5 BASIC5.58□□□□□ -1.52
RpainQ9CWY9 Gm37996-201ENSMUST00000191859 367 ntBASIC5.58□□□□□ -1.52
RpainQ9CWY9 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RpainQ9CWY9 Gm37681-201ENSMUST00000193880 727 ntBASIC5.58□□□□□ -1.52
RpainQ9CWY9 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC5.58□□□□□ -1.52
RpainQ9CWY9 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC5.58□□□□□ -1.52
RpainQ9CWY9 Gm43262-201ENSMUST00000202970 1219 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RpainQ9CWY9 Gm44281-201ENSMUST00000203090 166 ntBASIC5.58□□□□□ -1.52
RpainQ9CWY9 Gm18011-201ENSMUST00000203717 565 ntBASIC5.58□□□□□ -1.52
RpainQ9CWY9 Gm8039-201ENSMUST00000204758 712 ntBASIC5.58□□□□□ -1.52
RpainQ9CWY9 Gm44795-201ENSMUST00000205496 319 ntBASIC5.58□□□□□ -1.52
RpainQ9CWY9 Gm45157-201ENSMUST00000208729 401 ntBASIC5.58□□□□□ -1.52
RpainQ9CWY9 Gm45789-201ENSMUST00000213038 364 ntBASIC5.58□□□□□ -1.52
RpainQ9CWY9 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC5.58□□□□□ -1.52
RpainQ9CWY9 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RpainQ9CWY9 CT025660.1-201ENSMUST00000216094 457 ntTSL 5 BASIC5.58□□□□□ -1.52
RpainQ9CWY9 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC5.58□□□□□ -1.52
RpainQ9CWY9 AC153800.1-201ENSMUST00000219212 365 ntBASIC5.58□□□□□ -1.52
RpainQ9CWY9 AC131720.2-201ENSMUST00000220420 431 ntBASIC5.58□□□□□ -1.52
RpainQ9CWY9 AC140930.4-201ENSMUST00000220750 150 ntBASIC5.58□□□□□ -1.52
RpainQ9CWY9 Gm3086-202ENSMUST00000221248 310 ntBASIC5.58□□□□□ -1.52
RpainQ9CWY9 AC155314.1-201ENSMUST00000227624 508 ntBASIC5.58□□□□□ -1.52
RpainQ9CWY9 AC151907.1-201ENSMUST00000228812 412 ntBASIC5.58□□□□□ -1.52
RpainQ9CWY9 Bcl2l15-201ENSMUST00000062945 833 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RpainQ9CWY9 Olfr611-201ENSMUST00000078108 972 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
RpainQ9CWY9 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RpainQ9CWY9 Gm23452-201ENSMUST00000083327 107 ntBASIC5.58□□□□□ -1.52
RpainQ9CWY9 Mir218-2-201ENSMUST00000083649 110 ntBASIC5.58□□□□□ -1.52
RpainQ9CWY9 Gm25682-201ENSMUST00000083942 164 ntBASIC5.58□□□□□ -1.52
RpainQ9CWY9 Gm23795-201ENSMUST00000084006 137 ntBASIC5.58□□□□□ -1.52
RpainQ9CWY9 Olfr262-201ENSMUST00000087818 939 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
RpainQ9CWY9 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RpainQ9CWY9 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
RpainQ9CWY9 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
RpainQ9CWY9 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
RpainQ9CWY9 Gm38190-201ENSMUST00000192350 4755 ntBASIC5.58□□□□□ -1.52
RpainQ9CWY9 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RpainQ9CWY9 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.57□□□□□ -1.52
RpainQ9CWY9 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
RpainQ9CWY9 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
RpainQ9CWY9 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.57□□□□□ -1.52
RpainQ9CWY9 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
RpainQ9CWY9 D030025E07Rik-203ENSMUST00000197413 2346 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RpainQ9CWY9 AC122887.2-201ENSMUST00000219465 1603 ntBASIC5.57□□□□□ -1.52
RpainQ9CWY9 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RpainQ9CWY9 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RpainQ9CWY9 Mir804-201ENSMUST00000103251 95 ntBASIC5.57□□□□□ -1.52
RpainQ9CWY9 Gm25876-201ENSMUST00000104329 119 ntBASIC5.57□□□□□ -1.52
RpainQ9CWY9 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RpainQ9CWY9 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC5.57□□□□□ -1.52
RpainQ9CWY9 Gm12370-201ENSMUST00000117809 604 ntBASIC5.57□□□□□ -1.52
RpainQ9CWY9 Gm11843-201ENSMUST00000118984 425 ntBASIC5.57□□□□□ -1.52
RpainQ9CWY9 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC5.57□□□□□ -1.52
RpainQ9CWY9 Mup-ps19-201ENSMUST00000120390 519 ntBASIC5.57□□□□□ -1.52
RpainQ9CWY9 Gm14506-201ENSMUST00000121165 536 ntBASIC5.57□□□□□ -1.52
RpainQ9CWY9 Gm14766-201ENSMUST00000121689 367 ntBASIC5.57□□□□□ -1.52
RpainQ9CWY9 Gm12650-201ENSMUST00000121966 258 ntBASIC5.57□□□□□ -1.52
RpainQ9CWY9 Gm22106-201ENSMUST00000122544 127 ntBASIC5.57□□□□□ -1.52
RpainQ9CWY9 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RpainQ9CWY9 Gm13189-201ENSMUST00000138462 252 ntTSL 3 BASIC5.57□□□□□ -1.52
RpainQ9CWY9 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC5.57□□□□□ -1.52
RpainQ9CWY9 Gm26172-201ENSMUST00000158421 134 ntBASIC5.57□□□□□ -1.52
RpainQ9CWY9 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RpainQ9CWY9 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RpainQ9CWY9 Gm9587-201ENSMUST00000172449 454 ntBASIC5.57□□□□□ -1.52
RpainQ9CWY9 Gm6155-201ENSMUST00000173735 341 ntBASIC5.57□□□□□ -1.52
RpainQ9CWY9 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RpainQ9CWY9 Mir8118-201ENSMUST00000183962 129 ntBASIC5.57□□□□□ -1.52
RpainQ9CWY9 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RpainQ9CWY9 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RpainQ9CWY9 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
RpainQ9CWY9 4930500F04Rik-202ENSMUST00000202156 251 ntTSL 3 BASIC5.57□□□□□ -1.52
RpainQ9CWY9 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC5.57□□□□□ -1.52
RpainQ9CWY9 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RpainQ9CWY9 Gm45494-201ENSMUST00000211167 545 ntTSL 3 BASIC5.57□□□□□ -1.52
RpainQ9CWY9 Gm45524-201ENSMUST00000211374 1250 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RpainQ9CWY9 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC5.57□□□□□ -1.52
RpainQ9CWY9 AC123064.2-201ENSMUST00000217758 193 ntBASIC5.57□□□□□ -1.52
RpainQ9CWY9 AC132384.9-201ENSMUST00000218085 277 ntBASIC5.57□□□□□ -1.52
RpainQ9CWY9 AC164164.2-201ENSMUST00000221809 785 ntBASIC5.57□□□□□ -1.52
RpainQ9CWY9 Gm36501-201ENSMUST00000221857 745 ntBASIC5.57□□□□□ -1.52
RpainQ9CWY9 AC154636.1-201ENSMUST00000223226 126 ntBASIC5.57□□□□□ -1.52
RpainQ9CWY9 AC117202.1-201ENSMUST00000227007 445 ntBASIC5.57□□□□□ -1.52
RpainQ9CWY9 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
RpainQ9CWY9 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
RpainQ9CWY9 Gm22807-201ENSMUST00000082737 129 ntBASIC5.57□□□□□ -1.52
RpainQ9CWY9 Gm26108-201ENSMUST00000083973 191 ntBASIC5.57□□□□□ -1.52
RpainQ9CWY9 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
RpainQ9CWY9 Zfp280d-201ENSMUST00000098576 4387 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
RpainQ9CWY9 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC5.57□□□□□ -1.52
RpainQ9CWY9 Cdk14-201ENSMUST00000030763 4851 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
RpainQ9CWY9 Vmn1r13-202ENSMUST00000226892 5156 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
RpainQ9CWY9 Gm4541-201ENSMUST00000208901 1848 ntBASIC5.57□□□□□ -1.52
RpainQ9CWY9 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
RpainQ9CWY9 Gm44224-201ENSMUST00000204131 1463 ntBASIC5.57□□□□□ -1.52
RpainQ9CWY9 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
RpainQ9CWY9 Akr1c14-202ENSMUST00000118717 3183 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms