Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm44847-201ENSMUST00000207104 1991 ntBASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
Trim47Q8C0E3 Lrrtm4-201ENSMUST00000074662 3383 ntTSL 2 BASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Gm13078-201ENSMUST00000078695 2106 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Gm43781-201ENSMUST00000197634 2681 ntBASIC6.61□□□□□ -1.35
Trim47Q8C0E3 A830008E24Rik-202ENSMUST00000190485 5226 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Igkv4-71-201ENSMUST00000101325 288 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Gm23431-201ENSMUST00000104006 107 ntBASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Gm12149-201ENSMUST00000117511 654 ntBASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Gm14647-201ENSMUST00000119392 680 ntBASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Gm12771-201ENSMUST00000120246 135 ntBASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Gm8061-201ENSMUST00000122380 350 ntBASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Gm11351-201ENSMUST00000139335 583 ntTSL 2 BASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Gm26106-201ENSMUST00000157254 228 ntBASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Gm24499-201ENSMUST00000158446 104 ntBASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Gm18199-201ENSMUST00000173820 835 ntBASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Mir5125-201ENSMUST00000175240 79 ntBASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Gm24303-201ENSMUST00000178237 126 ntBASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Gm24306-201ENSMUST00000180229 79 ntBASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Mug-ps1-203ENSMUST00000190643 655 ntTSL 3 BASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Gm37609-201ENSMUST00000191778 678 ntBASIC6.61□□□□□ -1.35
Trim47Q8C0E3 4930562F17Rik-201ENSMUST00000195279 960 ntTSL 3 BASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Gm37358-201ENSMUST00000195492 479 ntBASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Gm42716-201ENSMUST00000196003 680 ntTSL 5 BASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Gm42522-201ENSMUST00000196071 255 ntBASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Gm43126-201ENSMUST00000201546 429 ntTSL 3 BASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC6.61□□□□□ -1.35
Trim47Q8C0E3 AC164567.2-201ENSMUST00000219363 445 ntBASIC6.61□□□□□ -1.35
Trim47Q8C0E3 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Gm25929-201ENSMUST00000082784 107 ntBASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Gm23456-201ENSMUST00000083335 137 ntBASIC6.61□□□□□ -1.35
Trim47Q8C0E3 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
Trim47Q8C0E3 AC114585.1-201ENSMUST00000228080 3680 ntBASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Ccl9-201ENSMUST00000019266 3006 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Gm43627-201ENSMUST00000197119 2299 ntBASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Plcb4-202ENSMUST00000110109 5217 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Adipor2-201ENSMUST00000032272 4184 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
Trim47Q8C0E3 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Gm43637-201ENSMUST00000202206 2926 ntBASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Tmc5-201ENSMUST00000057320 2926 ntAPPRIS P3 TSL 1 (best) BASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Gm24586-201ENSMUST00000116695 89 ntBASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Gm14750-201ENSMUST00000118262 516 ntBASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Gm12053-201ENSMUST00000119022 252 ntBASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Gm14115-201ENSMUST00000119242 482 ntBASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Gm12494-201ENSMUST00000121684 521 ntBASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Gm14742-201ENSMUST00000148284 381 ntTSL 3 BASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Gm25339-201ENSMUST00000157458 232 ntBASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Gm15970-201ENSMUST00000160623 834 ntBASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Gm3531-201ENSMUST00000162698 489 ntBASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Gm27960-201ENSMUST00000183445 184 ntBASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC6.6□□□□□ -1.35
Trim47Q8C0E3 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Gm8823-201ENSMUST00000193158 433 ntBASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC6.6□□□□□ -1.35
Trim47Q8C0E3 n-TStga1-201ENSMUST00000199903 109 ntBASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Gm7041-201ENSMUST00000201227 524 ntBASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Gm44984-201ENSMUST00000207802 394 ntBASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Gm19921-201ENSMUST00000210505 703 ntBASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Gm46223-201ENSMUST00000215196 675 ntBASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Gm4510-201ENSMUST00000218265 427 ntBASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Gm5830-201ENSMUST00000049117 443 ntBASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Kcnj16-205ENSMUST00000178798 3678 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
Trim47Q8C0E3 Inpp4b-202ENSMUST00000109851 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 74 ms