Protein–RNA interactions for Protein: Q8BXJ2

Trerf1, Transcriptional-regulating factor 1, mousemouse

Predictions only

Length 1,205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trerf1Q8BXJ2 Igkv13-82-201ENSMUST00000200308 346 ntBASIC5.14□□□□□ -1.59
Trerf1Q8BXJ2 Gm44181-201ENSMUST00000203106 483 ntBASIC5.14□□□□□ -1.59
Trerf1Q8BXJ2 Gm32453-201ENSMUST00000204183 456 ntBASIC5.14□□□□□ -1.59
Trerf1Q8BXJ2 Gm44646-201ENSMUST00000205847 421 ntTSL 2 BASIC5.14□□□□□ -1.59
Trerf1Q8BXJ2 Abca15-204ENSMUST00000207220 567 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Trerf1Q8BXJ2 Bc1-ps1-201ENSMUST00000208471 318 ntBASIC5.14□□□□□ -1.59
Trerf1Q8BXJ2 AC115047.1-201ENSMUST00000213795 322 ntBASIC5.14□□□□□ -1.59
Trerf1Q8BXJ2 AC152979.4-201ENSMUST00000219893 379 ntBASIC5.14□□□□□ -1.59
Trerf1Q8BXJ2 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC5.14□□□□□ -1.59
Trerf1Q8BXJ2 AC154305.3-201ENSMUST00000224661 552 ntBASIC5.14□□□□□ -1.59
Trerf1Q8BXJ2 AC241593.2-201ENSMUST00000225099 510 ntBASIC5.14□□□□□ -1.59
Trerf1Q8BXJ2 Defb1-201ENSMUST00000051017 872 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Trerf1Q8BXJ2 Defb13-201ENSMUST00000060587 452 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Trerf1Q8BXJ2 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Trerf1Q8BXJ2 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC5.14□□□□□ -1.59
Trerf1Q8BXJ2 Olfr987-201ENSMUST00000099929 1075 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Trerf1Q8BXJ2 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Trerf1Q8BXJ2 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Trerf1Q8BXJ2 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Trerf1Q8BXJ2 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Trerf1Q8BXJ2 9230113P08Rik-201ENSMUST00000176049 1987 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
Trerf1Q8BXJ2 Tsga10-203ENSMUST00000114902 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Trerf1Q8BXJ2 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Trerf1Q8BXJ2 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC5.14□□□□□ -1.59
Trerf1Q8BXJ2 Gm14552-201ENSMUST00000126906 2098 ntTSL 5 BASIC5.14□□□□□ -1.59
Trerf1Q8BXJ2 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Trerf1Q8BXJ2 Gm43200-201ENSMUST00000200385 2161 ntBASIC5.14□□□□□ -1.59
Trerf1Q8BXJ2 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 Gm44224-201ENSMUST00000204131 1463 ntBASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 Gm43696-201ENSMUST00000199385 6071 ntBASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 Arl6-203ENSMUST00000118438 875 ntTSL 3 BASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 Gm14082-201ENSMUST00000118582 801 ntBASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 Rpl36a-ps4-201ENSMUST00000121019 296 ntBASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 Gm13459-201ENSMUST00000121558 646 ntBASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 Gm15488-201ENSMUST00000121682 670 ntBASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 Defa-ps12-201ENSMUST00000122353 193 ntBASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 Gm23960-201ENSMUST00000157206 131 ntBASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 Gm24962-201ENSMUST00000157917 109 ntBASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 Gm26401-201ENSMUST00000158502 76 ntBASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 Gm23700-201ENSMUST00000158842 102 ntBASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 Gm9890-201ENSMUST00000171867 537 ntBASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 Gm28902-201ENSMUST00000191531 215 ntTSL 5 BASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 4930447N08Rik-201ENSMUST00000196290 497 ntTSL 3 BASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 Gm42694-201ENSMUST00000196951 358 ntBASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 Gm43825-201ENSMUST00000199650 734 ntBASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 Gm43892-201ENSMUST00000204373 265 ntBASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 AC153526.1-201ENSMUST00000219750 190 ntBASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 AC117797.2-201ENSMUST00000224419 531 ntBASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 Vmn1r36-202ENSMUST00000226635 918 ntAPPRIS P2 BASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 Olfr1461-201ENSMUST00000053772 939 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 Gm16415-201ENSMUST00000080097 489 ntBASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 Olfr1192-ps1-201ENSMUST00000120518 2738 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 Gm20679-201ENSMUST00000177285 1402 ntBASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 AC127371.2-201ENSMUST00000228108 1933 ntBASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Trerf1Q8BXJ2 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC5.12□□□□□ -1.59
Trerf1Q8BXJ2 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC5.12□□□□□ -1.59
Trerf1Q8BXJ2 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
Trerf1Q8BXJ2 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trerf1Q8BXJ2 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Trerf1Q8BXJ2 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trerf1Q8BXJ2 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
Trerf1Q8BXJ2 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Trerf1Q8BXJ2 Trav2-201ENSMUST00000103568 325 ntAPPRIS ALT2 BASIC5.12□□□□□ -1.59
Trerf1Q8BXJ2 Gm25419-201ENSMUST00000104215 191 ntBASIC5.12□□□□□ -1.59
Trerf1Q8BXJ2 Gm23746-201ENSMUST00000104229 125 ntBASIC5.12□□□□□ -1.59
Trerf1Q8BXJ2 Amelx-204ENSMUST00000112120 727 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
Trerf1Q8BXJ2 Gm14711-201ENSMUST00000117056 217 ntBASIC5.12□□□□□ -1.59
Trerf1Q8BXJ2 Gm15772-201ENSMUST00000118533 438 ntBASIC5.12□□□□□ -1.59
Trerf1Q8BXJ2 Gm11890-201ENSMUST00000119585 417 ntBASIC5.12□□□□□ -1.59
Trerf1Q8BXJ2 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC5.12□□□□□ -1.59
Trerf1Q8BXJ2 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC5.12□□□□□ -1.59
Trerf1Q8BXJ2 Gm23327-201ENSMUST00000157420 78 ntBASIC5.12□□□□□ -1.59
Trerf1Q8BXJ2 Gm26404-201ENSMUST00000158498 109 ntBASIC5.12□□□□□ -1.59
Trerf1Q8BXJ2 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
Trerf1Q8BXJ2 Gm17159-201ENSMUST00000169043 482 ntBASIC5.12□□□□□ -1.59
Trerf1Q8BXJ2 Vmn1r-ps47-201ENSMUST00000176694 907 ntBASIC5.12□□□□□ -1.59
Trerf1Q8BXJ2 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Trerf1Q8BXJ2 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC5.12□□□□□ -1.59
Trerf1Q8BXJ2 Gm28967-201ENSMUST00000187351 281 ntBASIC5.12□□□□□ -1.59
Trerf1Q8BXJ2 Gm28976-201ENSMUST00000188070 144 ntBASIC5.12□□□□□ -1.59
Trerf1Q8BXJ2 Gm37837-201ENSMUST00000191743 604 ntBASIC5.12□□□□□ -1.59
Trerf1Q8BXJ2 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
Trerf1Q8BXJ2 Gm5842-201ENSMUST00000195073 622 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 99.7 ms